FMO02153.5prime Sequence
1201 bp (1037 high quality bases) assembled on 2008-05-06
> FMO02153.5prime
CAGTCGACATGGCTTTATCCGTTCCCAAGGCTCCCGGTGTGTCGCAGATG
CTGAAGGATGGCGCCCGGATGTACAGTGGGCTGGAGGAGGCGGTGTTCCG
CAACATCAGCGCCTGCAAGGAGTTTGCACAGACCATGCGCTCTGCCTATG
GGCCAAATGGCATGAACAAGATGATCATCAATCACATCGAGAAGCAGTTC
GTGACCAGCGATGCCGGCACCATCATGCGGGAGCTGGATGTTGAGCATCC
AGCCGCCAAGTTGATCGTCATGGCCAGCCAGATGCAGGATGCCGAGGTGG
GCGATGGTACAAACTTCGTGGTGGTGCTGGCCGGAGCTCTGTTGGAGTCC
GCTGAGGAGCTGCTGCGTCTAGGAATCACCACTGCCGAGATCTCCGACGG
CTATGAAAAGGCCTTGGAGAAGGCTCTGGAGATTCTGCCCAATCTGGTGA
GCCACAAGATCGAGGACTATCGCAATGTGGAGAAGGTCAAGGAGGTACTC
CGCACATCGATCATGTCGAAGCAGTACGGCCAGGAGGACTTCCTCAACGA
TTTGGTGAGCAAGGCCTGCGTCTCCATCTTGCCGGATGAGGGCACCTTCA
ACGTGGACAACATTCGCATCTGTAAGATCTTGGGCAGCGGACTGACCAAG
TCTGAGGTGGTTCGCGGCATGGTCTTCAAGCGCTTCGTAGAAGGCGATGT
GACCTATGCAGAGAAGGCCAAGATCGTGATTTTCTCCTGCCCCGTCGATA
TTATCCAAACTGAGACCAAGGGCACAGTGCTGATCAAGTCGGCCGACGAG
CTATTGAGCTTTTCCTCCGGCGAAGAGAGCCTGTTGGAGAGCCAGATCAA
GGCTATCGCCGACGCAGTGTCAAGGTGGTTGTGGCCGGCGGCAAGTTGGC
GACATGGCTCTGCACTTCCTTAACAAATACGGTCTGATGGCCGTGCGTCT
CAACTCTAAGTTCGACTGCGTCGCTGAGCCGATCGTAAACGCCACTGTCT
GCGCGCATCACACGCCCAGTCAGGAGGAGTTGGGCTACTGCGACAAGTTG
CATCGAGGAACTGGGAGAACCCACATTGTGACTTCAGAACGAGGCAAGGA
CTCCGCCATGCACCGGGGTGTATCGTGGATTACGAACCTTCTGATGAACT
GAACGGTCTGGATGACCTATTTACCACTTCAAGTGTCTGTAACCGCGGGA
T
FMO02153.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8258-RA | 1904 | CG8258-RA | 79..1187 | 9..1103 | 5150 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8905657..8906674 | 1075..68 | 4585 | 98.5 | Minus |
| 2R | 25286936 | 2R | 8906853..8906912 | 68..9 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:36:45 has no hits.
FMO02153.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:35 Download gff for
FMO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8258-RA | 90..1180 | 9..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:33 Download gff for
FMO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8258-RA | 79..1169 | 9..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:31 Download gff for
FMO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8258-RA | 79..1169 | 9..1087 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:31 Download gff for
FMO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8905643..8906673 | 69..1087 | 98 | <- | Minus |
| 2R | 8906853..8906912 | 9..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:33 Download gff for
FMO02153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4793148..4794178 | 69..1087 | 98 | <- | Minus |
| arm_2R | 4794358..4794417 | 9..68 | 100 | | Minus |
