FMO02154.5prime Sequence
1215 bp (1015 high quality bases) assembled on 2008-05-06
> FMO02154.5prime
CAGTCGACATGTTGAGCCTGCGAAGTGTATTAAAACACTGCCTTTCGGCA
AAGAAAACGTGTAGCAGAAACATCTCCGCGCTGTACATAACCGGCGATAA
AGCGAACGAAAACTATGTGACTCTGCAGCCGTACATGGACTTCAATAAAA
CCTTTGGAGAGCGGCAATTTTTGGAGCAGAGCATCTCCAGCCGGGGATTG
GACATTCGTTTGGAAACTGTGCTCAGCAAGTACGAGAAGTATAAAACACA
TCACGCTCAGCTGTCCAAGGTGGCGGAGGAACGCGAAAGGGTGACCAAGC
GCCTAAAGGAGCTAACGAAATCTGGTAGTAGTGCGGTTCAGCTGGAGGAG
TTGAAAGAGCATGGGAAATCGTTGCGCAATGAGCTAAAGGCTCTGAAGCA
GACTCTCTATCCCATAGAGGATGACTTTATTCATGACTATCTGCACTTGC
CCAACCTTCTGCATGTCCAGTGCCCTGTTGGAGGGGAGGAAAAGCTTCTC
TATCGTCATGGGATACCCAAATCAGAAAATAAGACTACATCCCACTTGGC
ACGCCAGGAACTTGTACATTTTGTAGACAACAATCGTTACTACTTGATGG
AGCAGGCTGCTCTTTTTGACGTAAATGCCATGCAATCCCTGGCCCGCTAT
TTCGTCAACCACGGGCACTTCATTCAAACCGCCAATCCGGACTTTGTGCG
TTGCGTTCTCCTGGGAAGCAAATGCGACACCCTTATCCGACTATCATCTG
GTTCAGGAAGAGCACCTGCAAAACAAGATCAATACCGCCTATTTGACTGG
AGGTGCGTCCTTCGAGAGCTACCTTGGTGCCATGACCAAGCTGTGCGTGT
ATCCCTCGGTGCTGCCCCTTTCGGTATGTCTGCTGTGGTCGGAGCTACAA
CAGAGCGGAAGCGGATTTGTATGGGCTCATTCCTAGTCTTTATACGGCGA
CACAAACGATGCGGTACAATTTTTTGTGGCACGCAAACGGACAACGAAGC
GGACTCCCACTAGAGCATTTTCCTCATCTGGCCACTGATTTCTTACAAGC
ACTGACATACCATTCAGATTTCTTTATGCACAGCAGCAGATCTAACTTCG
GCGAAAGTTCAGCAGTCATTCGAAGTTTATGCCCCCTCCTGCACGCTATG
GTGTGGGGACGGATATACGCCAACCATATCGGAACACTTTGTTCTCTTAT
GACCGAAATCGCGAT
FMO02154.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Slimp-RA | 1532 | CG31133-RA | 67..1229 | 9..1161 | 5185 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24147804..24148901 | 1103..9 | 4910 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:23:56 has no hits.
FMO02154.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:26:07 Download gff for
FMO02154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31133-RA | 23..1188 | 9..1164 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:01 Download gff for
FMO02154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Slimp-RA | 67..1232 | 9..1164 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:21 Download gff for
FMO02154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Slimp-RA | 67..1232 | 9..1164 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:21 Download gff for
FMO02154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24147713..24148901 | 9..1196 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:01 Download gff for
FMO02154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19973435..19974623 | 9..1196 | 96 | | Minus |
