FMO02156.5prime Sequence
1204 bp (1056 high quality bases) assembled on 2008-05-06
> FMO02156.5prime
CAGTCGACATGGCCATGGAAGACGTGCAGAAGCACAGCGTGCACACGCTG
ATATTCCGCTCCCTGAAGCGCACCCACGATCTGTTCGTCTCCAACCAGGG
AAATCTGCCCGAAATCGACGAACGTTTAGAGAAGTTGCGACGTTCCATCA
AGGCGAAGGATGGCTATGGCCTTGTGCTGGACAAGGTGGCGAAGATCGGC
GAGGCCAGGAAGGCATCAGGAGCCCAAACGCCGGGCGACAAGACGCTGGC
CATCACCGATGGCAGTGCAACGGATGCGGCCAGCGGTGCCGGCAGTCTGG
TTAAGTACAATGCGGGCGCCAGGCCAGCGGAGAAGACAGCGCCACTGGTT
ACCGGCACACACACATCCCTGGTGCGCGCCTCCCTGGCGAACAGCAATGC
AGATATGAGCGCCAATGGCGCCATCGCCAGCCATCTGCAATTGATACCGA
AGAAGGCGCCCAGCATACCCAAGCCCAAGTGGCACGCACCCTGGAAACTG
TCGCGCGTCATCTCCGGCCATTTGGGCTGGGTGCGATGCATCGCCGTGGA
GCCGGGCAACGAGTGGTTCGCCACCGGCGCTGGCGATCGTGTGATCAAGA
TCTGGGACCTGGCCAGCGGCAAACTGAAGCTCTCGCTCACCGGTCATGTG
AGCACTGTGCGCGGTGTGGCCGTCAGCACGAAGCATCCGTATCTGTTTAG
CTGCGGCGAGGATCGGCAGGTCAAGTGCTGGGATCTGGAGTACAACAAAG
TCATACGGCATTATCACGGTCACTTATCGGCTGTTTACTCGCTGGCCCTG
CATCCCACCATCGATGTGCTGGCCACCTCCGGTCGCGATTCCACTGCCCG
CATCTGGGACATGCGGACCAAGGCGAATGTGCACACACTGACGGGCCATA
CGAACACGGTGGCCAGTGTGGTGGCGCAGGCCACCAATCCGCAGATCATC
ACCGGCTCCCACGATTCACGGTGCGTCTGTGGGATTTGGCCGCCGGGCAG
AGCGTCTGCACGCCTAACATTCACAGAAGTCGTGCGCAGCATAGTCTCAT
CATCGCTGTACATGTTCGCCTCGCCTCGCCGATAACATCAGCAGTGGCGG
CTGTACGAGGCCAGTTGGTGCGACTCCTCCGGCCACGTTCATGTCAATTG
CATGCGCGAATAGTGAGGCCGTTCTCGTTCCGGGGGGGAAACGGCACACA
GATG
FMO02156.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango4-RA | 1620 | CG1796-RA | 93..1300 | 9..1197 | 5290 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12021338..12022288 | 128..1072 | 4385 | 98.6 | Plus |
| X | 23542271 | X | 12021160..12021278 | 9..127 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:03:34 has no hits.
FMO02156.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:39 Download gff for
FMO02156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1796-RA | 91..1166 | 1..1072 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:32 Download gff for
FMO02156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango4-RA | 87..1162 | 1..1072 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:14 Download gff for
FMO02156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango4-RA | 87..1162 | 1..1072 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:14 Download gff for
FMO02156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12021154..12021278 | 1..127 | 97 | -> | Plus |
| X | 12021338..12022288 | 128..1072 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:32 Download gff for
FMO02156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11915187..11915311 | 1..127 | 97 | -> | Plus |
| arm_X | 11915371..11916321 | 128..1072 | 98 | == | Plus |
