FMO02157.5prime Sequence
1207 bp (1027 high quality bases) assembled on 2008-05-06
> FMO02157.5prime
CAGTCGACATGGAGGACATATTCCACTGGTGCCGCGAGGGCAACTCGATT
CAAGTGCGCCTCTGGTTGGATGAAACGGAGCACGACAACAATTTGGGAGA
CGACCATGGCTTCAGCCCGTTGCATTGGGTGGCTAAAGAGGGCCACGCCA
AGCTTGTGGAGACTCTGTTGCAGCGCGGTTCGCGTGTGAACGCCACCAAT
ATGGGCGACGACATCCCACTCCATTTAGCGGCAGCTCATGGCCACCGCGA
CGTGGTCCAGATGTTGATAAAAGAGCGCAGCGATGTGAATGCGGTAAACG
AGCATGGAAACACCCCCCTGCACTACGCCTGTTTTTGGGGCTATGACATG
ATCTGCGAGGATCTGCTTAATGCGGGAGCCCAGGTGGGAATCGCAAACAA
GGACGGGCACACACCTCTTGAAAAGGCCAAACCCAGTCTGGCCAAGAGGC
TTCAGGATCTTGTAGAAAAGAGCGGCAGAGAGGTTAAGGTTATCAGCTTC
AAGGAACAAAGCTGGCAGGGATTGAAGACGAGATCCCGGGATGCTACTTT
GTCCCGTTTCAAGGGAATCAGTATGGGAGACCTAGACCTGCATACCAAGC
TGTCGGTGACGCCATCAGGAGAAACTTGGCGCGGACGCTGGCAAAAGAAC
GATGTGGTAGCTAAGATCCTGGCCGTGCGTCAGTGCACGCCTCGTATATC
GCGAGATTTTAACGAGGAGTTTCCCAAGCTCCGCATCTTTTCGCACCCTA
CATTTTGCCTATTATTGGAGCATGCAATTCGCCACCCAATCTGGTGACAA
TTAGTCAGTTTATGCCACGTTCTTCGCTGTTTAGCCTGCTGCATGGAGCA
ACTGGCGTTGTGGTGGACACCAGCCAGGCGGTAAGCTTTGCCTTGGATGT
GCGAGAGGAATGGCTTTCCTGCACTCGCTGGAGCGCATTATTCCAACATA
TCACCTGAACAGTCATCACGTGATGATCGACGATGATCTGACGGCGAGAT
CAACATGGGCGATGCCAAATTCTCTTTCCAGAGAAGGGACGCATCTATCA
CCGGCTTGATGTCGCCCGGAAATGCAACGCAGCAGGCGATCGACTGGGAA
GCTGTGACATTGGACTTGCTATTCTTATTTGGGAGCTGACTCGCGCGAGG
TACCTTTCCCGGAGTGGTCGCCATGGAGTGCGCGCATGAAAATTGTCCTT
GTGGACG
FMO02157.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilk-RA | 1806 | CG10504-RA | 164..1367 | 9..1195 | 5445 | 97.8 | Plus |
| Ilk-RB | 671 | CG10504-RB | 164..252 | 9..97 | 445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21217790..21218336 | 263..808 | 2685 | 99.8 | Plus |
| 3L | 28110227 | 3L | 21218397..21218801 | 807..1195 | 1085 | 93.1 | Plus |
| 3L | 28110227 | 3L | 21217566..21217736 | 97..267 | 840 | 99.4 | Plus |
| 3L | 28110227 | 3L | 21217064..21217152 | 9..97 | 445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:03:27 has no hits.
FMO02157.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:40 Download gff for
FMO02157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10504-RA | 163..1383 | 1..1207 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:28 Download gff for
FMO02157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilk-RA | 156..1376 | 1..1207 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:10 Download gff for
FMO02157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilk-RA | 156..1376 | 1..1207 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:10 Download gff for
FMO02157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21217056..21217152 | 1..97 | 95 | -> | Plus |
| 3L | 21217567..21217732 | 98..263 | 100 | -> | Plus |
| 3L | 21217791..21218336 | 264..808 | 99 | -> | Plus |
| 3L | 21218399..21218810 | 809..1207 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:28 Download gff for
FMO02157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21210156..21210252 | 1..97 | 95 | -> | Plus |
| arm_3L | 21210667..21210832 | 98..263 | 100 | -> | Plus |
| arm_3L | 21210891..21211436 | 264..808 | 99 | -> | Plus |
| arm_3L | 21211499..21211910 | 809..1207 | 92 | | Plus |
