FMO02160.5prime Sequence
1202 bp (1009 high quality bases) assembled on 2008-05-06
> FMO02160.5prime
CAGTCGACATGAGCGAGTCGAATGCCACAGATGGTGTCCACGAGGTTGAG
GAGTCCAATCCGCTGGAGCAGTCGACCATTACGATGCTAGATGTCCTGGA
ACAGGAAAAGGAGCTGGAGGACGAGTACGCCGCAGTGCTGGGCGCCTCCG
ATGAGAAGTCGTGCACTTACGCCAAGGGCCCCATCGGCCGACAGGCTCTG
TACTCGTGCCTCACTTGTTGCCCCGAGGCGCGCGAGGATCTGGACAAGGC
CGCAGGAGTCTGCTTGGCCTGCTCCTATCGCTGTCACGAGCACCACGAAC
TGGTGGAGCTCTATACTAAGCGGAATTTCCGCTGCGATTGTCCCACCCAG
CGTCTGGGCAAGTGCTCCCTGAACCCACAAGTCGAGGGCGTTCAACCACG
TAACGTGGGCAATCTGTATAACCAGAACTTCCAGGGGCTGTACTGCAAGT
GCAAGCGACCCTATCCCGATCCCGATCGCACCGTTGAGGAGGTTATGCTG
CAGTGCGCCATCTGCGAGGACTGGTTCCACTTGCCGCACATGAAAGCGCC
CGGCGCCAGCGACAAGTGGCTGGATGTCTGCAGCGAAATGATTTGCGATG
GCTGCATGGATGCCAAACCCTTCCTAAAGGACTACACTGGATTAGCCCTG
CAGCCTGTGCTAGAAGATGCGAAGGAGGACAAGCCGGAGGCTGACGATAG
CCAGCTGAAGAACGAGTTGGACCGCAGCATCTGCGATATCATGAAAGTTC
CTGAAGGTGAATCTCAGCCAGACGAACGCGAACCCAGCCAGAAGCGCGCC
AAACTGGACGATTGTCGTCGGCCCAAACCAACCAAGGAGCATCAGGAGCT
GCTTTCTGGACAAATGACTGGCGAAATCACTCTGTCAGTGCTCCGAATGC
CTGTCGCTTTACAAGGAACTTGCCGTGAGTTTCTGCTGGATGTCGAGGAT
TCGCTAAGACGTACGAGGAGCGCGGCATGAAGCGGGCTGAAGAGATTCCA
GTATGAGCAGATCCGGGCACTGGCCTCATTGACGAACCAGCAATCGAATG
CGATTACCGAATACATCGCATGAGAAGCTAAGAATACCTGCCAGGCAATC
CGCGCAGCAGAAGTAATAACGAGGAGGAATCATTCGCTCATGCCGGGCAA
TGCCAATGAAACATGTCCACCTGGGATCTAGCCTTATTTCTGTTTGCCGA
CG
FMO02160.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15141-RA | 1683 | CG15141-RA | 138..1349 | 6..1193 | 5035 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17410778..17411618 | 6..846 | 4190 | 99.9 | Plus |
| 2L | 23513712 | 2L | 17412793..17412947 | 844..995 | 625 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:39 has no hits.
FMO02160.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:28 Download gff for
FMO02160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-RA | 117..1210 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:36 Download gff for
FMO02160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-RA | 133..1226 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:52 Download gff for
FMO02160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-RA | 133..1226 | 1..1082 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:52 Download gff for
FMO02160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17410773..17411618 | 1..845 | 99 | -> | Plus |
| 2L | 17412795..17413041 | 846..1081 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:36 Download gff for
FMO02160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17410773..17411618 | 1..845 | 99 | -> | Plus |
| arm_2L | 17412795..17413041 | 846..1081 | 92 | -> | Plus |
