FMO02162.5prime Sequence
1243 bp (228 high quality bases) assembled on 2008-05-06
> FMO02162.5prime
CAATCCACATGCGGACGCACGGACTACGGTTGGTGCTCTTGGCCCTGCTG
CCCACGATGGCCCTGGGCCTGCTAGAGGGCCTGTACTGTGGCAAGGAAAA
CTGTTACGACGTGCTGGGCGTCACCAGAGAGTCGTCCAAGTCGGAGATCG
GCAAAGCATACCGCCAGCTGGCGAGGCGCTATCATCCAGATCTGCATCGG
GGTGCCGAGGCCAAGGCGGCGGCGGAGACGCAGTTTAAGCTGGTGGCCAC
CGCCTACGAGATCCTGCGCGATGAGGAGTCGCGCACGGACTACGATTACA
TGCTGGACAACCCGGATGCATACTATGCCCATTACTATCGCTACTACCGG
CGACGCGTGGCGCCCAAGGTGGATGTGCGCGTGGTTATCGTGGTCGTCCT
AACCATTGTGTCCGTCATCCAGTACTATTCCGGCTGGCAGCGCTACGATT
CTGCCATCAAGTACTTTGCCACGGTGCCCAAGTATAGGAACCAGGCCCTG
GAAATAGCTCGCGACGAGATCCAGGAAAAGATCCAAAAGAAGGGCAAGAA
TCGTATGTCCAAGAACGATCAGGCGATGAGCTGGAACGGATCATCCGGCG
GGTGATCGAGGACAAGATGGACGTTAAGGGCGGCTATGCGAAGCCGACAC
TCTGGGATGTGCTGTGGGTGCAGCTGATCATCTGCCCCTACACGATACTC
TCGTTCATCGTGTGGCACGCTCAGTGGTTCTGGCGCTACACGGTAATGAA
GCATCCGTATGGTCTCGAGCGAAGCTCTACCTCATCCGCCGGCTCCTGAG
CATGAGCCAGCATCAATTCGAGGCTCATGACGATCAAGCTGATCGAGGAG
TACCTGCATCTGAGCTGTGCAAGCGCGAGAACTTCGTCGCCTGGAAGGCT
GAACAGGAAGTAGGAGATGAAAAAGAAGCTGGCGAAGAATCCTCCGATAA
CAAGGCGTACAGGCGATACATGAAGAACCACGGACCCGCCGCATCACCTT
TGAAGATGCAGCTTTCTACGACATTCGTTTGTCTCGACTGGGCCAGGATA
GTGACCATAATCATCATCATAATCGAATCATAATCCAAACTAGCTAGGAA
ATCCTGGTCACTGACTTGTGCCTTGAATGCTCGCAAATAAAAGGTCCCGC
CGGCTACCGATGGTCTGGAAAATTCGAATGGAGTCTGAGGTCATACTGGA
ACTTCTCAACGACGAGAACCCAGGGCGAGACGCCTAATTCCAG
FMO02162.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7872-RA | 1653 | CG7872-RA | 230..1228 | 9..1007 | 4545 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15578434..15579432 | 9..1007 | 4345 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:17:16 has no hits.
FMO02162.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:47 Download gff for
FMO02162.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7872-RA | 336..1347 | 1..1012 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:09 Download gff for
FMO02162.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7872-RA | 221..1232 | 1..1012 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:13 Download gff for
FMO02162.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7872-RA | 221..1232 | 1..1012 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:13 Download gff for
FMO02162.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15578425..15579428 | 1..1003 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:09 Download gff for
FMO02162.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15472458..15473461 | 1..1003 | 97 | == | Plus |
