FMO02165.5prime Sequence
1224 bp (982 high quality bases) assembled on 2008-05-06
> FMO02165.5prime
CAGTCGACATGCAGCGAGTCCAGGCCGACCAAAAGCCAGCCAGAATGCAC
CAGCATGCACATACGCATTCGCACGCGCACAGTTTGCAGCATGCGGAGGA
GAAGGAGCACAATAGCAATGAGATGACGACCAACTTGTCGTCGACTGGCC
GAATTGCGGCCAGTAGCAGTGCCACGCCCAGCGCAGCAGCGGGAGGCGGG
GCCAGCGGAGCACCCACTCCGCCCAAGAGTCTGGCGCTCAATCAGAACCA
TCACTATGCACCCGGTTCGGATACATCCGGGGAACAGGAGGAGGAGCTGC
TGGACTCGCGATACGAGTGCGCCATTTGCATCGATTGGCTAAATGAGCCG
GTGTTGACGTCGTGCGGCCATCGATTTTGTCGCAGCTGCCTCACCGCCTG
GATGCAAAAGAACAATCAATGCTGCCCCATGGACAACAAGCGTCTGTCCG
CCGAGCACGACATCTTTCCGGACAACTACACGCGCCGCGAGATCGAGCAA
CTCAAGCGAGATTGCCCCAACTCCTCGCTGGGCTGTTCGGTGGTTGCCTC
GCCCATCGAACTGCATCGCCATCTGCCCAGTTGTCCCTATCGGCGGCAGC
AGGAGCCGCAGGAGGAGAAGTGCCCGTTTGCCAAGATCAAGTGCGATTTT
GTGGGCCGACCAGAGACCAATCAGTTGGAGGAGCACCTCAAGGCCGACAT
GCCGCATCACATGCAGCTGATGCTGCAGGCATTCCAGCAGACAGCCATTG
CCACCTGGCAGCCACACAAGCCCAGCACAAGTGGCGCCGCCGTGGAGAAT
GGGTCATGGCCAGCAGCAGCTGCCGCCACCGCCGCAATATGCCAATGGTG
TGGATGAGCAGATTGTGCAAACGACGTACCAGAGATTGTGGTTTTGGAAC
AGCGGACACGCGAGCAGGAAACGCGACTGGAGAATATGCAAAAGCAGCTG
CGTCTGGCCACGCCAGCAAGCGCCCGTTGATCCGCGCTACAGCAATGGCA
CGATTGTGTGCGCATCGAGCAGCTGGGCGGCTTGGTGGCTCGCCTGCGGC
ATGCCACAATCAAGTGTTACTTCGCACGAGTGCTACACTTCGCCGCATGC
TCAAGTTCTGTGGCGGCGAACATCAGCCGGAACGCATGTGCTCACTTGCA
TGTACTGATGCAATCGAAACAGATTACACTGGAACTGTCTCTCTAGAGGG
CAATACTAAGATGTGTCATGTGAG
FMO02165.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Traf6-RA | 2788 | CG10961-RA | 126..1282 | 9..1153 | 5260 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8156169..8157261 | 1099..9 | 4970 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:28:16 has no hits.
FMO02165.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:51 Download gff for
FMO02165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10961-RA | 98..1278 | 1..1166 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:51 Download gff for
FMO02165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..1298 | 1..1166 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:46 Download gff for
FMO02165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..1298 | 1..1166 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:46 Download gff for
FMO02165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8156169..8157269 | 1..1099 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:51 Download gff for
FMO02165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8050202..8051302 | 1..1099 | 98 | | Minus |
