FMO02172.5prime Sequence
1195 bp (1007 high quality bases) assembled on 2008-05-06
> FMO02172.5prime
CAGTCGACATGATCAACACAGGAAAACTAGCCGGACGGACCCTGTTCATC
ACGGGAGCCTCTCGAGGAATTGGCAAGGAGATTGCTCTAAAGGCGGCCCG
CGATGGAGCCAACATTGTGGTGGCGGCCAAGACGGCGGAACCGCATCCCA
AGCTGCCGGGCACCATCTACTCGGCTGCGGAGGAGATCGAGAAGGCCGGC
GGAAAGGCCTATCCCTGCGTTGTGGATGTGCGGGATGAGCAACAGGTGCG
CAGCGCCGTTGAGGCCGCGGTGGCCAAGTTCGGTGGCATCGACATTGTGA
TCAATAACGCCAGCGCCATCTCGCTGACCAATACCCCGGATACGGACATG
AAGCGCTACGACCTGATGCACAACATCAATACTCGAGGCACCTTTCTGGT
GTCCAAGGTGTGCCTGCCGTACCTGAAGAAGAGCAACCACGCCCACATTC
TCAACATCTCGCCGCCGCTGAGCATGAAGCCCAAGTGGTTTGGCCCGCAT
GTGGCCTACACCATGGCCAAGTACGGTATGTCCATGTGTGTGCTCGGCAT
GGCCGCGGAGTTCAAGGACGAGGGAATCTCCGTCAACGCTCTGTGGCCGC
GCACTGCCATTCACACGGCGGCCATCGAGATGCTGACGGGTCCAGATTCC
GCCAAGTGGTCACGCAAGCCGGAGATCATGGCCGATGCCGCCTACGCAAT
CCTGACCCGTGAGCCCAGGCAGTCTACTGGTCAGTTCTTTGTGGACGACG
AGGTGCTGGAATCGGCGGGCATCACTGATCTCACCGAATACGCCTGCTTC
CGCGAGAACGCCGACAGCTGATGGTGGACTTCTTCGTGGAGGAGAAGGAG
CTCCGGTAGAGATGAAGCTGCGGCAGAGATGCTGCTGCTCCCGCAGTGGA
GGAGACGTCAGATTCCGCAGCTGTTCCGGAAATCGATCTCTCTCTCGCCC
GAGATCGTCTCGAAGACGCAGCTGTCTTCAGTTCAACATCGCGGCGCGAG
CAGGCACTGTTCTGGACCTGAGACGGCTCGGATCTGGCGGTGCGACGCCA
ACTGCCGCTCCGACGCCACCTCACCATGACCGAGACTTCTTGCACTGTTT
CCGGTACTGGAAGGCGCTCCCGCTAGGACCGAGCTGAAAATACCGCGCAT
TCGAAGTCTCTAGGCGTGGAGAAAGCCTTAGTGATGAGGGGCTTC
FMO02172.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5590-RA | 1492 | CG5590-RA | 163..1258 | 9..1079 | 4835 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27677684..27678676 | 9..990 | 4415 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:24:17 has no hits.
FMO02172.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:44 Download gff for
FMO02172.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5590-RA | 106..1205 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:09 Download gff for
FMO02172.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5590-RA | 159..1258 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:32 Download gff for
FMO02172.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5590-RA | 159..1258 | 1..1079 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:32 Download gff for
FMO02172.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27677680..27678779 | 1..1079 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:09 Download gff for
FMO02172.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23503402..23504501 | 1..1079 | 97 | | Plus |