FMO02177.5prime Sequence
1184 bp (1021 high quality bases) assembled on 2008-05-06
> FMO02177.5prime
CAGTCGACATGCCAGCTCATTTGGATTTAACCCTAGAGGAAATGACCAGG
ATTGCTTTGGGTGTGCCCGAGTTAACCCACGTAAATGTGGCTGTACTCCA
AAGTCTTTTGAATGTCCTTCTCAAGAAACTGAACTGTCAGAATGATATGG
TAAGGATAAGTGGCTTCGAGGGCAAGTGTATGGAGCGCATTCTCGAGCAA
TCCAAAATATCTCCACTGCCCTTCGACGTGGAGGCTATTGTTCCAATTTC
CGAGCAATTGGATAAAGTTCAAGAGTTGGACAAACGCATCAAGCAGCTGG
AGTGCAAGTTGGAGTGTCACTTTCAGCAGATTCGCATTTGCAACAAGGCC
AAGGACAAGAAGTACAAGATCAACCAGGCCGAACAGTACGCCTCTCCTTG
CGAGGATCTGTGCACCGTTTGCGATGAGGACAACAAGATCGCATGCAGTC
TGCTGGCCAACATGGACTTCATGAAAAAGCTAATGCGACGTATAGCCACA
CCCATTCTGGACCGAATGGAAGAGGTCAGCCACAAGCTGGAGAAGTTCTA
CCTCACACTTGAGGCTTTTCTTAAGCAAACCGAAGCTTTATTTAATCGTT
TGGAAATAGTCAAGCAATGTGTGGTGGAGATCGAAGGTCTGAGGACTCTT
GTTCAGGAATACAACCTTACTTTTCTGGGAACCATGGAGGAACTGCAGGA
TATGCTCGACAGCAAGCTGGATAAGGTGCATATGCCTGCTCTTAAGAAGT
ATATACGCGATCGCTTCGATGATATAGATCGCCGGCTGAGATTGATTGAG
GATAAGGATGCATGTCCCAGGGCCGCTGGATTTATCAATACGGGGCTATC
TTGTCTATCCTGTAATAGTCCCAAAGTGGGTGTCGACGTCGGTCCTCAAA
CCATGGGACTATTCCCGGACGCTCCGGTCAGGCACCTGCCTCCCAAGTTA
ACCGGATCACCGTAATTGTCAGAGATCGTGTCTTGTAGATCTGTGAGAGG
ACTACCTATGGTGCGAGTAACACTTTGATCTGATGTCCTCTCAACGTTCT
GCTCGTCTTGCTCTGCAGTCTGCAGTGCCGAAGCTATGACGCAATCTATG
CATTGTATTCTGTATATCGGTCAGAACCTACCGGTACAGCATCGGACCTC
GTGGGCGCGGCTCCAGGTGAAGTTGTCTAATCGA
FMO02177.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10589-RA | 1365 | CG10589-RA | 126..1272 | 9..1128 | 4940 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20927951..20928940 | 9..995 | 4775 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:54:42 has no hits.
FMO02177.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:08:05 Download gff for
FMO02177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 126..1171 | 9..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:55 Download gff for
FMO02177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 126..1171 | 9..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:07 Download gff for
FMO02177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 126..1171 | 9..1042 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:07 Download gff for
FMO02177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20927951..20928996 | 9..1042 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:55 Download gff for
FMO02177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20921051..20922096 | 9..1042 | 98 | | Plus |
