FMO02186.5prime Sequence
656 bp (656 high quality bases) assembled on 2008-05-06
> FMO02186.5prime
CAGTCGACATGCAGGAACAAAGTCCCGAGCTGTACGAGGAGGTGAAGCTC
TTCCGTAACGCCCGCGAGCGCGAGAAGTACGACAACATGGCCGATCTATA
CGCAATCATCAACACCATCCAGCAGCTGGAGAAGGCCTACATCCGCGACT
GCATTACGCCGCAGGAATACACGGCCGCCTGCTCCAAATACCTGGTGCAG
TACAAGGTGGCCTTTAAGCAGGTGCAGTGCGACGAATTCCCCTCGGTGGA
GACGTTCGTTAAGAAATTCCGGCTGGACTGCCCTGCTGCGCTGGAGCGGA
TCCGCGAGGACCGACCCATCACCATACGCGACGATAAGGGCAACACCTCC
AAATGCATCGCCGAGATCGTGTCGCTGTTCATCACAATCATGGACAAGCT
ACGCCTGCAGATCAACACCATGGACGCCCTACAGCCGGACGTCAAAGACC
TGGCTGACAACATGAATCGCCTGTCCCTCATTCCCGAGGACTTCGACGCC
AAGCTGAAGGTGGAGAAGTGGCTGGGCAGCCTGAACGAGATGCAGGCCTC
CGACGAGTTGAGCGAGGGCCAGGTCCGCCAGTTCCTCTTCGACCTGGAGT
CGGCGTACGCGGACTTCAACAAGCTGCTGCACAGCCAGGCAAGCTTTCTA
GACCAT
FMO02186.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps28-RB | 1173 | CG12770-RB | 88..721 | 5..638 | 3155 | 99.8 | Plus |
| Vps28-RA | 805 | CG12770-RA | 88..721 | 5..638 | 3155 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8079321..8079954 | 638..5 | 3155 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:24:07 has no hits.
FMO02186.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:08:14 Download gff for
FMO02186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12770-RA | 77..725 | 1..651 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:51 Download gff for
FMO02186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps28-RA | 83..731 | 1..651 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:04 Download gff for
FMO02186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps28-RA | 83..731 | 1..651 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:04 Download gff for
FMO02186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8079311..8079955 | 1..651 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:51 Download gff for
FMO02186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3966816..3967460 | 1..651 | 98 | | Minus |
