FMO02187.5prime Sequence
1209 bp (959 high quality bases) assembled on 2008-05-06
> FMO02187.5prime
CAGTCGACATGCTCAAGTTCCAGGTCCATTCTCCGGGCAAGGTCATACTC
CATGGCGAACACGCCGTGGTCTATCATCGTCCCGCCCTCGCCGCCGTAGT
GGGTTTGGGCACTACTCTGAGATTTCGGCAGCTGGAGGACAGCCAGGTGG
CAAGTTTTCAACTGGAGGCCCTTAACTGCACACTGGAGATCCAGTTGCCG
GAGTTCAATGGATTTTTGGCTGAATTTAGGAGTAAATACCCATCAGATAG
CACGGCCAATCTGTTGGAAGCCGTCCGCGCAGAGGTGTCCAAACAACTTG
AACGATCCGGAGGCAATGCACCGAAGCAGCACACCCAGCGGGCATTCATC
TCCATATACTATTTGCTGGCCGGCGCTGTACTCTCCGCACCCGGCGACAA
GAAACTGACGCTGCAAACCGGTTTCCAGGTGCAGGTAGACAGCCAGCTAA
CCGTGGGTGCGGGTTTGGGCAGTTCCGCCTCTTTCGGAGCAGCTTTGGCC
ACGACATTTCTCATTTTGGCCGGACACTTTGATAGAGACAGCTACTTGTC
GGAGGCAAACCAGGCGTTGATCTCGTCCTGGGCTTATGAATCGGAGCGTG
TTAATCATGGCACGCCCTCGGGTCTGGACAACACTGTATGCACCTACGGC
GGAATGTTGCGGTATGTCAAGGGCCAGGGCTTCCAGTCGCTGAAGATCCA
GAAACCACTAAAACATCCTGCTGGTGGACAGTCGTGTGAGTCGCAGCACC
GCCGACATTGTGGCCAAAGTTCGTCATCTGGGAGATGCCTTTCCGCAGCT
CATCGAGGCCATTTGGCAGGCTTGCGAGGAGCTTGTTGCCGCCGCCGTTC
CACTCTACGAAAGCTTTGGGCAACGCCCAAGACGATAGCTCGGAAATTCG
AGCAACTTGAACGCCTGTTCAAAATCAACAATGATCTGTTGAAGGCTATC
GGAGTGTCGCACCCGAAACTGGAGCAATCTTCACCATCGCTTTAAGCGTG
GCTTCTTTCAAGCTGACGGGCGCCGGCGCAGTGGCTATGTCCTCGTCTGC
TCAGAGACTACGAGTGCAACGAAGTCTACTGAGCCTAAAAAGGACCTCGA
ATCGCGGGCTTGGGTTCTGTTACCACGGCCGGCGGCGAAGGATGCCGTAG
TCCTGAATGAACCAGCTTTCTAAAACCCTCTCATTGCGCCGAGGGCCCCG
TAAGAGTAC
FMO02187.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33672-RA | 1976 | CG33672-RA | 716..1862 | 9..1143 | 5140 | 97.4 | Plus |
| CG33671-RB | 1517 | CG33671-RB | 257..1403 | 9..1143 | 5140 | 97.4 | Plus |
| CG33671-RA | 1976 | CG33671-RA | 716..1862 | 9..1143 | 5140 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12634323..12635426 | 1104..9 | 4805 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:51:14 has no hits.
FMO02187.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:08:15 Download gff for
FMO02187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33672-RA | 736..1839 | 9..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:38 Download gff for
FMO02187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33672-RA | 716..1819 | 9..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:59 Download gff for
FMO02187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33671-RA | 716..1819 | 9..1104 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:59 Download gff for
FMO02187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12634323..12635426 | 9..1104 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:38 Download gff for
FMO02187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8521828..8522931 | 9..1104 | 98 | | Minus |
