FMO02188.5prime Sequence
530 bp (530 high quality bases) assembled on 2008-05-06
> FMO02188.5prime
CAGTCGACATGGGGCTTCCTCCATTCAATGTCAGCGGCAGCCCGTTCAAT
GTGGTTCCCATTCACAACTACCCGGAGCTTATGAAAGACACTTGCGCCCT
AATCAACGCAGAGTGGCCACGATCGGAAACGGCGCGCATGCGCTCCCTGG
AGGCCTCCTGTGACAGCCTACCCTGCAGCCTGGTGCTGACCACCGAGGGA
ATGTGCCGCGTGATCGCTCACCTCAAGCTCAGCCCGATCAATTCCAAGAA
GAAGGCCTGCTTCGTCGAGTCCGTGGTGGTGGACAAGCGGCACCGTGGCC
AGGGATTCGGCAAGCTGATCATGAAGTTCGCCGAGGACTATTGCCGCGTC
GTGCTGGACCTCAAGACCATATATCTGTCCACCATCGACCAGGATGGATT
CTACGAACGCATTGGCTACGAGTACTGCGCTCCCATTACAATGTATGGGC
CGCGCCACTGTGAGCTGCCCAGCTTGCAAAATGCCAAAAAGAAATACATG
AAGAAGGTCTTAGCAAGCTTTCTAGACCAT
FMO02188.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8481-RA | 1412 | CG8481-RA | 305..808 | 9..512 | 2520 | 100 | Plus |
CG8481-RB | 1506 | CG8481-RB | 402..902 | 12..512 | 2505 | 100 | Plus |
MED6-RB | 1758 | CG9473-RB | 1..63 | 73..11 | 315 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9768922..9769423 | 11..512 | 2510 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:24:17 has no hits.
FMO02188.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:08:16 Download gff for
FMO02188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8481-RA | 280..791 | 1..512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:56 Download gff for
FMO02188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8481-RA | 297..808 | 1..512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:10 Download gff for
FMO02188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8481-RA | 297..808 | 1..512 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:10 Download gff for
FMO02188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9768913..9769423 | 1..512 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:56 Download gff for
FMO02188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5594635..5595145 | 1..512 | 99 | | Plus |