FMO02191.5prime Sequence
1229 bp (979 high quality bases) assembled on 2008-05-06
> FMO02191.5prime
CAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTACACTTGTCC
CTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCCAGCCTGCC
GTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCTGAAACAAC
AGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCGCCTGCTGG
GGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACGCCCCAGTG
CCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACAGGTTAGGA
CCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGCTCTCCCAA
CTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCGCTAGAGTG
CACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTTCGACTTTC
GGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGGATGTGCTG
GGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACTCGACTGTC
GGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGGTCCGGAGT
TGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCGGTCTCTGC
GATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGATGCCACGTA
CAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGCCTCGCTCT
TTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGCAGATACTT
ATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGGACACTTTAAGGCC
TTCTCGCACGAACAGTATGGACACTCATCGATGTGGAGGGCAAGCGGTAT
GCTTCAAGACCGTTGTGCTGCCGCTGCTGCCCAAGAATGATCTTTGGCTT
ATTCTAAAATACACCCATATCAAGGCTGCTCGAATAGTGACTCTTCCGCG
CCTTCCCCGAGTTCATTCTTGCACTGCCTGCCAGATTCCCTACAGCCGCC
CACAGCAAAGAATCAGAATAACATTTCTATCCGCGATCCACCAGGTACCG
GCCATGTGCTGGAATGAAACTACTGCGTGACACCCTGGAGCCCCACCATA
AATCTATGTAGCGTGTTTCTAGAGGGCTCCCTTTACACACACGATTGCCA
CATCCACGGAAAACACGGGAAACCATTTC
FMO02191.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eogt-RA | 1869 | CG9867-RA | 238..1403 | 9..1169 | 5010 | 96.3 | Plus |
| Eogt-RB | 1806 | CG9867-RB | 175..1340 | 9..1169 | 5010 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2381334..2382296 | 9..969 | 4545 | 99.1 | Plus |
| 2L | 23513712 | 2L | 2382352..2382461 | 971..1081 | 275 | 89.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:21:22 has no hits.
FMO02191.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:08:20 Download gff for
FMO02191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9867-RA | 195..1290 | 9..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:58 Download gff for
FMO02191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eogt-RB | 175..1270 | 9..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:21 Download gff for
FMO02191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eogt-RB | 175..1270 | 9..1102 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:21 Download gff for
FMO02191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2381334..2382296 | 9..969 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:58 Download gff for
FMO02191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2381334..2382296 | 9..969 | 99 | -> | Plus |
