FMO02202.5prime Sequence
449 bp (191 high quality bases) assembled on 2008-05-06
> FMO02202.5prime
TAAAAAGTACCTTATCAGTCGACATGGAAGAACGCTCACTGCTCCGCGCG
GTGAAATCAACTAATCCACTGGTCTACCTGGACATTTCCATTGGCAATCC
AGATGCGGGTCGAATGATAATTGAACTGCGCAAGGATGTTGTGCCGAAGA
CAGCGGAAAATTTCCGTGCCCTGTGCACGGGCGAATGTGGTATCTGTACT
CTGGGCAAACCGCTCCACTACAAGGGCACAAAGTTCCACAAGATCAAGCG
AGTCTTCGTCGTCCAGAGTGGGGATGAGGGGAAGAACGATGGAATCAGCG
GCGAGAGCATCTACGGACCAGTTTTCGATGACGAGAACTTCGAACTCTCA
CACAACGAAAAGGGCGTGGTCATTATGGGCAACTACGGCAATCCAAACTC
CAACTACTCTGCAGTTTTTCATTTCCGCCGCGGGCTGTGAAAATCTGAA
FMO02202.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8336-RD | 1395 | CG8336-RD | 145..569 | 24..449 | 1850 | 95.8 | Plus |
| CG8336-RC | 1445 | CG8336-RC | 195..619 | 24..449 | 1850 | 95.8 | Plus |
| CG8336-RA | 1500 | CG8336-RA | 250..674 | 24..449 | 1850 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9630379..9630624 | 105..350 | 1170 | 98.4 | Plus |
| 3L | 28110227 | 3L | 9630818..9630915 | 351..449 | 355 | 92.9 | Plus |
| 3L | 28110227 | 3L | 9630221..9630294 | 24..97 | 325 | 95.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:57:35 has no hits.
FMO02202.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:55 Download gff for
FMO02202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8336-RC | 193..615 | 24..447 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:01 Download gff for
FMO02202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8336-RA | 250..674 | 24..449 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:11 Download gff for
FMO02202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8336-RA | 250..674 | 24..449 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:11 Download gff for
FMO02202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9630221..9630294 | 24..97 | 95 | -> | Plus |
| 3L | 9630374..9630624 | 98..350 | 97 | -> | Plus |
| 3L | 9630818..9630915 | 351..449 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:01 Download gff for
FMO02202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9623321..9623394 | 24..97 | 95 | -> | Plus |
| arm_3L | 9623474..9623724 | 98..350 | 97 | -> | Plus |
| arm_3L | 9623918..9624015 | 351..449 | 92 | | Plus |
