FMO02204.5prime Sequence
1202 bp (1057 high quality bases) assembled on 2008-05-06
> FMO02204.5prime
CAGTCGACATGATTGCGCAAAGTGTAATCAGCAAACTGCGACCGTGTGCC
CGCCGCTTGGCCAGCACGAGCTCCAAAGCCGCAGCTCCCAAATTCAACTG
GCAGGATCCGCTGAATTTGGAGAGCCAATTGACCGAGGAAGAGGTGGCCA
TTCGGGATGCGTTCCGTGGATACTGTCAGGCCGAGCTGCAGCCGCGCGTC
AAGATGGCCAATCGCCTGGAGACGTTCGACAAGAAAATTATGGAGGAGAT
CGGCAGTCTGGGTGTCCTCGGCTGCACCATTAAGGGATACGGCTGCGCCG
GAGTCTCTAGCGTTGCCTACGGCTTGCTCACCCGCGAGGTGGAGCGCGTG
GACTCCGCTTATCGGTCTGCTGTCAGTGTCCAGAGCTCGCTGGCCATGGG
CGCCATCTACGACTTTGGATCCGAGGAGCAGAAGCAACGCTATTTGCCCA
GCATGGCGGAGGGCAAGCTGATTGGTGCCTTTGGCCTAACTGAACCCAAC
CACGGTAGTGACCCCGCTGGCATGGAGACCCGTGCCAAGTACGATAGCAA
AAGCAAGACATACATCCTGAACGGATCTAAGACGTGGATTACTAGTGCGC
CCATCGCAGACGTCATAGTCGTATGGGCAAAATGCGAGGATGGCAAGGTA
CGCGGCTTCCTGGTGGATCGCAAGATATCCGGCAAGGGTTTGGAGACGCC
AAAGATCGAGGGCAAGTTCTCTCTGCGTGCTTCGCCCACGGGTATGATCC
TGATGGACGAGGTCCGTGTGCCAGAGGAGCAGTTGCTACCCAATGTGGCC
GGCTTTAGTGGACCCTTCAGCTGTCTGAACAACGCTCGCTATGGAATCGC
GTGGGGAGCCCTGGGAGCAGCTGAAACCTGCGTGGAGATTGCTCGCCAGT
ATACACTGGATCGCAAACAATTCGGTCGTCCTTTGGCTGCAATCAGTTGA
TCCAAAGAGCTGGCCGATGCATCACAGAGATTGCGTTGGGTCTGCAGCTT
GCTGCATGTGGGTCGCTCAGGATCAAAGCTGCCACGCCCGAAATGATTTC
CCTTCTAAGCGGACAATACTGGCATTCGCTTGAATAAGCGCGCCAATGAA
GGGACTGGCTGGGTGCCACGGAATCCACGCACGATATACTGTGAATCGGC
ATTACTCACTGGGGCTCAGTTACCCATGAGCACCGCACGAATAATTATAG
CG
FMO02204.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9547-RA | 1441 | CG9547-RA | 95..1225 | 9..1125 | 5125 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6493200..6493855 | 1116..474 | 2495 | 95.6 | Minus |
| 2L | 23513712 | 2L | 6493970..6494438 | 477..9 | 2345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:43:41 has no hits.
FMO02204.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:58 Download gff for
FMO02204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9547-RA | 90..1221 | 9..1125 | 97 | -> | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:13 Download gff for
FMO02204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9547-RA | 95..1226 | 9..1125 | 97 | -> | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:07 Download gff for
FMO02204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9547-RA | 95..1226 | 9..1125 | 97 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:07 Download gff for
FMO02204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6493189..6493854 | 475..1125 | 96 | <- | Minus |
| 2L | 6493973..6494438 | 9..474 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:13 Download gff for
FMO02204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6493189..6493854 | 475..1125 | 96 | <- | Minus |
| arm_2L | 6493973..6494438 | 9..474 | 100 | | Minus |
