Clone FMO02211 Report

Search the DGRC for FMO02211

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:22
Well:11
Vector:pMK33-CFH-BD
Associated Gene/TranscriptO-fut2-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02211.5prime Sequence

1196 bp (1015 high quality bases) assembled on 2008-05-06

> FMO02211.5prime
CAGTCGACATGCGAGGGAGCTGGCCCAGGCTTGGGTTCCCGGCGCTGCTC
CTGCTCCTCCATCTGCTGACCGGCTCGGATGCCGCCGTCCGGAATGGGAC
TGCAAAGCGGGAAATTGGCGATTCCCGGGGAAGCAGCGGCACCTGCGTCA
AAGGGTTCCTGCAGGAGATCCTGCCACTGCCAGCGACTTGTCCGCCTGAG
GTGCTCGGGATGAGGGGCGCCGTGTATATCCTTTACGACGTAAACATCTC
CGAGGGCTTCAACCTGCGCCGAGACGTCTATATTCGCATGGCGGTGTTCG
TGCGCCGGCTGCAGAGGAGAAGGCGCTTTCGCCATGTGCGCCTTGTGCTG
CCGCCGTGGCCCCGCCTCTACCACTGGCACTCGCAGGGCCTGCAGCAATC
TGGACTGCCCTGGAGCCACTTCTTCGACTTGGCCAGTCTGCGTCGCTACG
CGCCCGTTCTGGACTACGAGGAATTCCTGGCCGAACAGCGCTTATTCGGC
AATCCTGGCGCACCGCTGGTCCATGTAGGGCACGCTTTCCGGTTGCAGCA
CTACGAGGTCATGCTAGAACAGGGCATATTTCGGGACAAGTTCGAGCGCG
TCACGGACAAGCCGTGCAGCGAGGGATCCCTGTCGGGAGGACCATTGCTG
CAGCAGGCGGAGCTGCGCGTGGGGCGTTTCCACTGCGTTCGGTTCCAGGG
CAGCGCCGGACTGCTGGAGAAGTTGCTTCGCGAGGCGATCGACGAGGACA
CGGCGGGACCGGAGGACGTCGACGACATGCGCACGTACGCTTTGCTCAGC
GCCGAAACGGTGCTTCACGACCACTGGGGCGACGAGCACTTTGGCAGGCC
CGGCGTTCCATGCGTTTCGCCCGTCGGCTCGAACAGGTGGCCGCCGACTT
CCGACGGCAGGCCCTGACACACAGATGCTTCGGCCGTGTCAACGGCCCGC
CATGTGGGAGCTGGAGCGGCCGAAGCGCAACGCCAAGGCGGCGATTACCT
CTGCCGCCCACCTAAGCGGGCGACTTTGTCGCTCGCGGATGCACCACTCC
CACCCTGAAGGCGCCTGCCAGCAGTCAAGCACTGCTTGCCGGATTTACAT
GACCACTGTTCTGGCCACTGACTCGCTTCGACTGAGACTAGAGCTTTCTA
CCCTTCGCTCGGCATTCGAGCCAGATACTAAGGCTCCAACGACAGG

FMO02211.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:20
Subject Length Description Subject Range Query Range Score Percent Strand
O-fut2-RA 1634 CG14789-RA 18..1148 9..1122 5120 98 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1464909..1465979 1069..9 4765 98.7 Minus
Blast to na_te.dros performed on 2014-11-28 19:09:19 has no hits.

FMO02211.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:52 Download gff for FMO02211.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14789-RA 454..1590 9..1130 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:12 Download gff for FMO02211.5prime
Subject Subject Range Query Range Percent Splice Strand
O-fut2-RA 18..1154 9..1130 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:09 Download gff for FMO02211.5prime
Subject Subject Range Query Range Percent Splice Strand
O-fut2-RA 18..1154 9..1130 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:09 Download gff for FMO02211.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1464915..1465979 9..1063 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:12 Download gff for FMO02211.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1358948..1360012 9..1063 98   Minus