FMO02212.5prime Sequence
1205 bp (935 high quality bases) assembled on 2008-05-06
> FMO02212.5prime
CAGTCGACATGGCACTCATCGAAATTTGTCTGGCCCTTGTGGTCATCGGT
TATCTCATCTACAAATGGAGCACGGCCACCTTCAAAACCTTTGAGGAAAG
GAAGCTCTACTTCGAAAAGCCATATCCCTTTGTGGGTAATATGGCTGCAG
CGGCCTTGCAGAAGTCGTCCTTCCAGAGACAACTCACCGAGTTCTACGAA
CGCACTCGTCAACACAAACTGGTGGGCTTCTTCAATATGCGCACACCTAT
GATCACGCTAAACGACCCGGAGCTGATCAAAAAGGTCTGCGTAAAGGACT
TTGACCACTTCCCCAACCACCAGCCCTTCATCACCTCCAACGATCGCCTG
TTCAACGACATGCTCAGCGTGATGAGGGACCAGCGGTGGAAGCACATGAG
AAACACCCTCACTCCGGTCTTCACGGCGGCCAAAATGCGCAACATGTTCA
CCCTGATGAACGAGAGCTTCGCGGAGTGCCTGCAGCACCTGGACAGCTCT
TCGAAAACGCTTCCCGGCAGAAAGGGCTTTGAGGTGGACATGAAGGTGAT
GTGCAACAAGCTCTCCAACGACATCATCGCCACTACCGCATTCGGGCTAA
AGGTTAACTCGTACGACAACCCGAAAAATGAGTTCTACGAGATCGGGCAG
TCGCTGGTTTTCTCCCGAGGACTTCAGTTCTTCAAGTTCATGCTGTCCAC
CTTGGTGCCAAAGCTTTTCAGTCTTTTGAAGCTTACTATTTTCGACTCCG
CCAAGGTTGATTACTTTTGCTCGCTTGATGGTGGAAGCCATGCAGTACCG
CGAGAAGCACAATATCACCAGGCCCGACATGATCCAGCTCCTGATGGAGC
CAAGAATGAGTCGGAGGATAAATGGAACGGACGATGAGATCGTGGCCCAT
GCTTTCTTTTTCTTCTTCGCCGCCTTCAAAACTACTCCATCTGATCTGCA
CCAAACTACGAACTGCTTTACATCCGACGTCAAGAAGCGTTATACGAAGG
AGATAGTCGAAGACCAGAAAGCTCTGACTGGGGCACCACTCACTTACGAC
GCCGTGCAGAAGATGAACTTACTGAACTGGTCACTCCGAGTCCGTTTCGA
AGGTGAATCTAGCGCCGCCACGAATGCCGTACTCAGACTACGCCTACGGA
TGAGATGACTAGCGTGTTCTGCATCTCGCAGAGGATAGGCACTACTCAAA
TCTAA
FMO02212.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp9b2-RA | 1667 | CG4486-RA | 51..1171 | 9..1121 | 4895 | 96.9 | Plus |
| Cyp9b1-RA | 1752 | CG4485-RA | 131..1134 | 108..1105 | 1610 | 79 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7131312..7131819 | 722..215 | 2540 | 100 | Minus |
| 2R | 25286936 | 2R | 7131884..7132089 | 214..9 | 1030 | 100 | Minus |
| 2R | 25286936 | 2R | 7130891..7131239 | 1066..723 | 1015 | 90.6 | Minus |
| 2R | 25286936 | 2R | 7129029..7129510 | 696..215 | 745 | 77 | Minus |
| 2R | 25286936 | 2R | 7128709..7128939 | 953..724 | 495 | 85.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:55 has no hits.
FMO02212.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:53 Download gff for
FMO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4486-RA | 42..1127 | 1..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:55:14 Download gff for
FMO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp9b2-RA | 46..1131 | 1..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:44 Download gff for
FMO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp9b2-RA | 46..1131 | 1..1083 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:44 Download gff for
FMO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7130873..7131239 | 723..1083 | 92 | <- | Minus |
| 2R | 7131312..7131819 | 215..722 | 100 | <- | Minus |
| 2R | 7131884..7132094 | 1..214 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:55:14 Download gff for
FMO02212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3018378..3018744 | 723..1083 | 92 | <- | Minus |
| arm_2R | 3018817..3019324 | 215..722 | 100 | <- | Minus |
| arm_2R | 3019389..3019599 | 1..214 | 98 | | Minus |
