FMO02213.5prime Sequence
1141 bp (987 high quality bases) assembled on 2008-05-06
> FMO02213.5prime
CAGTCGACATGGATCCCGAGTTCGTGAACAAATACAATCAGGTCCTTAGC
CGTCTGAAGCTAGTGGAGAACTTCGATGGCAGTGATCCTGGCAAGCTGCC
GCAGTTCCTGCACAAAATCGAGGCCCTTATGCCGGCCATAAATAGTTTCG
ACGACTACTACAAGTTTCAATTGATAGGACATATCAAAAATAAGTGCACA
GATCGCGCCAGGGAGGCGGTCTTCACGCGACAAATGAGCGCTCCCGTGGG
CAATGGCAATGGCAATGGCGGCGGGAATGGTCATCTCCTGAAGGCCGAGT
CCTGGCTAAAACTCAAGGATCAACTGCTGTACAACTATGCGGAGCGGGAG
TCTAGCTACTCGCTGATACACAAGATACGCAGCGCTGTCTTGGACTCGAA
CATAGAGTTGTACTACCAGAAGATGGCCAAACTCAAGCACAGACTGATCA
ATAGAAAGCTCACGCACAATGACACCCTGTACAGTCTCGAGGACATAGAG
CGCATCACGCTGCAGGTGTTCCGAGATCATCTGCCCGAGCCGACGCACTC
GATGATCCTGCGCCGGAATCCCAAGAGCATGGAGGAGGCCTATCGCTACA
TAGTGGAGGTGCAGCAGCAGTTCTACACACAGAGCGGATCTCTGGCCAGT
GACCATCAGGCGGCCACCTTCAGCACCAGCCACAAGCAGCAGTCCTACGG
CGTGGGAATGGGCGGAGTGGGCGTGAGCACCGTTGGCGTGGGCGTCGGAT
GGGCATGGGCGCTGTGGGGTTGGGACTCTCCTCCTACGTTCGTCAAATGT
CCAACGACAAGGGACAGCAGATAGCACGAAAGAGCTACTACAATCAGTCG
GCTTCGGCCGGTGGGCGCCGGCAAATCATCCGATGTTCAAGAGCATTGGC
AAACCCACCTTTAAGTCCAAGCTTCAGCTACAATGGCACCAGCAGCAATT
CGGGCATGGGATCGAATTACTTCGAGTAACAGAAAGTCGGAACATCAAGC
AGAACCTACCAGCAGCCGAAGAGTCGAACTACTTCGAGGACCTCGTCGCT
AATGCTTTGGAGAAAGGCAAGCTTTCTAAGACCATTCGTTTGGCGCGGCC
GGCCGAGTAATGGTCAATAATCCATAATCTTTATACTATTC
FMO02213.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Grp-RB | 2295 | CG4680-RB | 365..1419 | 9..1064 | 4845 | 97.8 | Plus |
| Grp-RA | 1505 | CG4680-RA | 113..1167 | 9..1064 | 4845 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16394950..16395987 | 9..1048 | 4555 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:18:44 has no hits.
FMO02213.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:08 Download gff for
FMO02213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4680-RA | 313..1376 | 1..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:24 Download gff for
FMO02213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Grp-RA | 313..1376 | 1..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:38 Download gff for
FMO02213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Grp-RA | 104..1167 | 1..1064 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:38 Download gff for
FMO02213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16394941..16396004 | 1..1064 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:24 Download gff for
FMO02213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16388041..16389104 | 1..1064 | 97 | | Plus |
