FMO02224.5prime Sequence
518 bp (518 high quality bases) assembled on 2008-05-06
> FMO02224.5prime
CAGTCGACATGTCGGAGGACAAACAGTTCATCCGCCGGGATAAGGGCACC
AAGAAAACTTCCACGTCTTTGAAGGAGGTGGACATCTACCGGGACACCTT
CATTCGCTATATGGGCTACAGCAACGAGATTGGCGAGTCCTTCCGCCCGC
TGGTGCCCAAGTCTCTGGTGGCCGCATCCTACGGCATGGCCATCGGATAC
GTCTGCACGGACACTTTTGACAAGGCACTGCGCCTCCAAATGGAGGGCGC
TTCCTCCAGAGAAGTGGCCGTCAAGGGCGGCGACGTCTTCTGCTGGCAGA
TGCTGGCCTCCGTCGCCATTCCCGGCCTGGTCATCAATCGGATCACCTGG
GCCACCAAAACACTGCTGAGCAAAGCGCCTATGCCCGTGCTAAAGACGGT
GCCCACCCTGGTGGGTCTGGCCAGCATACCGCTTATCATCCATCCCATTG
ACAGCATGGTTGACCGCCTGATGGACGCCACCTACCGCAAGACGGTGCGG
GCAAGCTTTCTAGACCAT
FMO02224.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7772-RA | 843 | CG7772-RA | 205..696 | 9..500 | 2460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17906652..17906879 | 341..114 | 1140 | 100 | Minus |
| X | 23542271 | X | 17906178..17906338 | 500..340 | 805 | 100 | Minus |
| X | 23542271 | X | 17906951..17907057 | 115..9 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:44:40 has no hits.
FMO02224.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:07 Download gff for
FMO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7772-RA | 219..719 | 1..500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:14 Download gff for
FMO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7772-RA | 196..696 | 1..500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:48 Download gff for
FMO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7772-RA | 196..696 | 1..500 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:48 Download gff for
FMO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17906178..17906337 | 341..500 | 100 | <- | Minus |
| X | 17906653..17906878 | 115..340 | 100 | <- | Minus |
| X | 17906952..17907062 | 1..114 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:14 Download gff for
FMO02224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17800211..17800370 | 341..500 | 100 | <- | Minus |
| arm_X | 17800686..17800911 | 115..340 | 100 | <- | Minus |
| arm_X | 17800985..17801095 | 1..114 | 96 | | Minus |
