FMO02227.5prime Sequence
1215 bp (902 high quality bases) assembled on 2008-05-06
> FMO02227.5prime
CAGTCGACATGGACAGCGAGTCGTTGGCCTGTTCGTCGGTGGAGAAGGAC
CTGACCCGAGTGGTCAGCAAACTGGAGCAGCTTCACGAGAACGCAGAGGC
GGACATCGGAGATATAGCCACACAGATGTCGGAGCTGGTAGAGGTTCTCA
GCAGGGCGGAGCAGCTGGTGACCACTCTGAACTCGAGCACCCAGGTGTCC
CAGGACGATCCCATGGGCGATGCGGTGAGCATGCAGGTGGAGACGGAACC
GACGGCACCACAACGCCTAACCGAGCGCCAAGTGGAGAGCGTCCGGAATG
CTCTCGCCAGGTGCCACGAGCGCGTGCAAAAACTGTCCACGGAGCACCGC
GATCTGCACGGCTCCATTTCGAAGATCGGCAAGGCCATTGACCGCAACTT
TAGCGCCGACTTCTCGTCCACCATGCGAGTGGACGTGCTGCAGGACGAGG
AGAACCTGATGTTGCTGAACAAGGCCATTGCCAAGCATTATTGTCGCCAG
GGCATGGACGATGTGGCTCGCACGCTAATCCGCGAGTGCAAGATGTCGCC
GGAGCATGCCCAGGATGTGTTCGACTCGGAGCGCGAGTTTGCCGACATCT
ACGGCATTTGGGTGAAGATCCAAAAGCGGGATCTGACTGACGCCCTCAAG
TGGGCAAAGATGTACTCCCAGCAGCTGAGTGACCGCCACTCGCTCATAGA
GTTCCGGCTGCACCGCATGCGTTTCATGCAGCTGGTCTCCTACGGATTGG
ACTCGCAGCGCGAGGCCATCTCCTACGCTCGACTGACTTCAAGAAGTTTG
CTGTGCGCTATGAGCACGAAATAGCCAACTTGATGGGCCAGCTTTATATA
TCTGCCCAGCGGAACTGGAGAACTTCGCCTTTACAAGCACTTCTTGGGTC
AGGAGAAGTGAACCGAACTGTCGTTCATATTCCTCAAGACGCATGCTCAC
TGCTAGGCATTAGCAAGAACTCCGTCCTGTCTGTGTGTCAATGCCCGGAT
GCCCTGCCCTGCCCGCTTGCCTCATATCAGCAGGTGATGCAGTCGCGCTA
GTCCTTGGCATGTGGAACGGCTTGCACGAGTGGCCAAATGAATCGATCTG
CACCCGAATTCCGATTCCACTCGATCTTGCATGCCCATATTGCCCGCAGA
CTTCCGAGAAATCCGCGAAAAGGACCTGGCGTCCATGATCATAATATCAC
CAGACAGCTCGTACT
FMO02227.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3295-RA | 1853 | CG3295-RA | 247..1404 | 9..1158 | 5080 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21016077..21017200 | 1128..9 | 4680 | 97 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:54:05 has no hits.
FMO02227.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:26 Download gff for
FMO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3295-RA | 247..1422 | 9..1172 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:28 Download gff for
FMO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3295-RA | 247..1422 | 9..1172 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:49 Download gff for
FMO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3295-RA | 247..1422 | 9..1172 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:49 Download gff for
FMO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21016025..21017200 | 9..1172 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:28 Download gff for
FMO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16903530..16904705 | 9..1172 | 96 | | Minus |
