FMO02231.5prime Sequence
1226 bp (1025 high quality bases) assembled on 2008-05-06
> FMO02231.5prime
CAGTCGACATGTTGTTACTGGCGCTAATCGTTGTGATACTATCACTGCTC
GTCTTCGCGGCCCGACGACGTCATGGATACTGGCAGAGAAGGGGCATACC
GCACGACGAGGTACACCCGCTTTTCGGAAACATCAAGGACTGGCCAAATA
AGCGGCACATTGCCGAGATCTTTCGGGACTATTACTTCAAGTACAAGAAC
TCCGATTACCCATTCGCTGGATTTTTCTTCTTTTTCACCCGCACTGCTGT
GGTCACCGACATGGAATTGCTCAAGAGGGTGCTGATCAAGGACTTCAATC
ACTTTGAGAATCGGGGAGTCTTCTACAACGAGATCGATGATCCGCTGTCG
GCCACCTTGTTCAGCATCGAGGGTCAGAAGTGGCGTCATCTGCGGCACAA
ACTGACACCCACTTTTACGTCCGGCAAAATGAAGAACATGTTTCCGATTG
TTGTGAAAGTTGGAGAAGAAATGGATAAGGTCTTCAGAAGTAAAACCGCT
GCGGATCGGGGTCAAGTTTTGGAGGTTGTGGATCTGGTGGCACGGTACAC
CGCCGATGTGATCGGCAACTGCGCATTCGGTCTCAATTGCAACAGCTTGT
ACGATCCAAAGGCTGAATTTGTGTCAATTGGCAAGCGGGCGATCACCGAG
CATCGCTACGGGAATATGCTGGATATATTCCTCTTTGGATTTCCCAAGTT
ATCGCGCCGCTTACGTCTGAACTAAATATCCAGGAGGCAGAGGACTTTTA
CACCAAGATCGTGAGGGAAACCATTGACTACCGTCTACGGACGAAGGAAA
AGCGAAATGATTTCATGGACAGTCTGATAGAGATGTATAAGAATGAGCAG
TCGGGAAATTCGGAGGATGGCCTGACCTTTAACGAACTTCTCGCTCAGGC
TTTCATATTTTTTGGGGCTGGGTTTGAGACAGCTCCCACGACCATGGGAT
TCGCTCTATATGAGCTGGCCAGGAACCAGGATGTCAGGATAAACCTCAGG
AGGAGATGGCAATGTGTTCGCAAGCATAACAAGAGGTCACCTACGAGGGA
TCAGGAGAATGAATACCTGGGAGCAGGTGTGTGGATGGAACGCCTGGGAA
GTACCAGTACTGGTTCATTCTTAGATGAACTGAACCGACTTTCGCCGTGA
AATCAAATCTCAATGCAAGGAACTGGTTGATCCGGGCTTTGGCCATCTCA
TATGGAATTCGCGGCACACATATATT
FMO02231.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a17-RB | 1727 | CG10241-RB | 28..1170 | 9..1142 | 5060 | 97.3 | Plus |
| Cyp6a17-RA | 1546 | CG10241-RA | 28..1170 | 9..1142 | 5060 | 97.3 | Plus |
| Cyp6a23-RA | 1761 | CG10242-RA | 69..1082 | 42..1050 | 1755 | 79 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14873980..14875026 | 9..1050 | 4835 | 98.6 | Plus |
| 2R | 25286936 | 2R | 14875897..14876826 | 42..970 | 1660 | 78.8 | Plus |
| 2R | 25286936 | 2R | 14882993..14883096 | 867..970 | 190 | 78.8 | Plus |
| 2R | 25286936 | 2R | 14878162..14878240 | 365..443 | 185 | 82.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:58:01 has no hits.
FMO02231.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:30 Download gff for
FMO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10241-RA | 3..1137 | 1..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:20 Download gff for
FMO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a17-RA | 22..1156 | 1..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:25 Download gff for
FMO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a17-RA | 22..1156 | 1..1133 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:25 Download gff for
FMO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14873974..14875068 | 1..1096 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:20 Download gff for
FMO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10761479..10762573 | 1..1096 | 97 | | Plus |
