FMO02235.5prime Sequence
1215 bp (1001 high quality bases) assembled on 2008-05-06
> FMO02235.5prime
CAGTCGACATGAAGCGACTCCTAAACCCTACTAGACTGAGACTGGATTGG
TTGAGACGAAGCTCTATAGATGTGACGACTGCTCCCCATGTTCCTGTGCT
CTGCGACACCGCCATTGAATACCTGCAGCCCGTTCCAGGAGGCACCTACT
TCGACATGACTTTCGGAGCTGGTGGCCACACGCGGCGTCTTCTGGAGAAG
TGTCCCGAGGCAAAGGTATACGCCCTAGATCGAGATCCATTGGCCCACCA
ACTGGCCCGCGATATGAGCGAATCCGAAGAGTTCAAGGGTAGGCTGATTC
CCCTGCTTGGAAAATTCTCCGATTTACCAAAGCTTTTCAAAGAACATGGC
CTGGCCAAGAACTCGGTGGACGGGATGCTTTTTGATTTTGGTTGCAGTTC
CATGCAATTCGATGAGGCGGTCAGAGGCTTCTCCATCTCGAGGGACGGTC
CACTGGACATGCGAATGGATGGTGGCCACAGCGGAGGGGTTACAGCTGCC
GATGTGTTGGCTAATGTTGAAGAGGGCGACCTTGTGAAGATTTTAAGGAT
GTATGGTGAAGAGAAAGCAGCCAAGAAGATAGCCAGAGGACTGGTAGACG
CGCGCAACGCCCTCTTTAAAATCGAGACCACCAAGCAGCTGGCAGATATA
ATTGAAAACATCATGGATGGCGGGACCAGGAAGGATAAGCTTCGACGACC
GGCACACTCAGCCACCAAGACCTTCCAAGCCATCCGCATATTTGTGAACA
ACGAACTAAACGAGATCAACTACGGTATGGTTTTGGCCAACGAAATCCTC
CGTGTGGATGGACGCTTGGTGACCATTACCTTCCACTCGCTGGAGGACAC
TATCGTGAAGCGTCACATCAACGGAAACGTCCTGCAGGCGCCGCCAATGC
TCTTCCCCTCAAGTACTCAGCCATTATGCATAGACGAGCCAGAATATACT
AGAATCACTGACCAAGAGAGCTGGAACACTACTCGCCATGTCATGTGCCA
GACGCCGACGAGGTGGCGGGACACACGCAGTCGATCCGCAAGCTGAAAGC
AGCGTCAACAAACGCAGCTTCTTAGAACATCGTTGGCGCGCGGGCCAGGT
AAGGTGCCAAATCTAATCTAATCCTAACCTAATCACACTAGCCTAGGGAT
CTGCTGACATGGCTGGAATTCCACAAAAAACGCCCGGGGCCACGAGACGT
CTCGGTAAAATACTC
FMO02235.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1507 | CG14683-RA | 405..1465 | 9..1058 | 4970 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10697874..10698928 | 9..1053 | 4705 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:35:09 has no hits.
FMO02235.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:21 Download gff for
FMO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RB | 392..1464 | 1..1061 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:59 Download gff for
FMO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 395..1467 | 1..1061 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:38 Download gff for
FMO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 395..1467 | 1..1061 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:38 Download gff for
FMO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10697864..10698940 | 1..1062 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:59 Download gff for
FMO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6523586..6524662 | 1..1062 | 98 | <- | Plus |
