FMO02238.5prime Sequence
1187 bp (1000 high quality bases) assembled on 2008-05-06
> FMO02238.5prime
CAGTCGACATGGCCTTTGTAGCGCGTCGGAGTAGCGATGGCTCGGTGGTG
GATCGTCAGCAGGTGTCTGGTCGGGAAAAAGTACGTCCAGCTTCCCAGTC
GGACATTAGTGATGAGGATTCGGAGTCGCTGCTGGGCTATACAAACCACA
CCTATGGGGCTCCCACAGTGAGGTATGTTGGCCAGGGTGAAGATCGTGAA
GCGGTGGAACCTCAGCTAGATTATGAGGATTTTGGGGATTCTCTGGGGGA
TCATGCCGACAATTCGGAAAGCGAGACGGATTCCATTTTGAGTTTCTGCA
AGGAACTGGATGAGGAGGAGGCCAACGATGCATTGCTAAATGGCAGAATG
AGCTTCACAGACGAGAAGGCGAAAGTTGAGGATAAAGCGAATGCAGATGA
TGTGTTTCACCGGGTCATGAACAAAGGCGATGAGGCGGCTGCCACGGACA
CGGAGACCGTGATGAACTTTGATCACGATGTGCAGAGCCTTAGCTCCTTA
GGCAGCTGCACGCCAACGGTGACGCAACGCGGTGAGGATGTCGACAATTT
GGACAATATCAGCGGCAGGACATTTTTCAAGGAGGAAAAATCGCACAGCA
TTAACACCAGGACCTTTTGCAAGGATAACAATCTGGATGCGCTGAGCGGC
AGGACCTTCTACAAGCAGGCCTCCGTAAAGGAGACTAACCAGGGCCAGAT
TTCCAGTCGGACATACAGCCTGAGTAGCTCGGGCAACAATCAAAACCATG
ACGCATCCTCGATGTCCACCTGCAGCTGGTCGGACATGTACCGCGGTGCT
CTGCAGTCCACCGATGGATGCACCGGTATGCCCCCTCTGAGCCTGGCCAG
CGTCGTCTCTGACTCGTCCACGTGCTACAGCAGCTGGAGGAGCATAAGGA
ACGCCCTGGACCGCAGCCTTCGAGGACTGGAAGCGCGAATGCCGCCGAGA
GCAGAAGATCTGCTGCTGCAAACAGGAGCGCGAAAGCGGGAGGCGGAGCA
GCACTGCACTGAATATTGCCTAGTAGCACTTCAGGAGTGGTGTCGTCGCT
AGGAGACCATCAGCAGCACACGGCAAGCAAAGAATCCTCGACCTCTAGCT
CAGGTGCATCGTCAGCTTAGCACGCCCTTACGAAGGTTCGGAACCAAGAC
GCTGCAAATGGGACAGCCAGCGGGATCAGGCCACAGG
FMO02238.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18266-RA | 1804 | CG18266-RA | 107..1218 | 9..1101 | 4930 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5596939..5597997 | 9..1055 | 4560 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:06:46 has no hits.
FMO02238.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:38 Download gff for
FMO02238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18266-RA | 99..1218 | 1..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:13 Download gff for
FMO02238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18266-RA | 99..1218 | 1..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:28 Download gff for
FMO02238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18266-RA | 99..1218 | 1..1101 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:28 Download gff for
FMO02238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5596931..5598050 | 1..1101 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:13 Download gff for
FMO02238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5596931..5598050 | 1..1101 | 97 | | Plus |
