FMO02243.5prime Sequence
976 bp (976 high quality bases) assembled on 2008-05-06
> FMO02243.5prime
CAGTCGACATGTCGAAATTTCACACCCTTATGGGCGCACTGTTTGACCCC
TTCCTCTTTGTTCTCCGCCTGATTGCAAACATGAGTTCCCCTATCTACGA
GCAATATCGGTTCGGGCCGTCACGTCCCCTCTCCGCTGGATCACGTACAC
TGTGGAAGCCAAACAAGGTGCATCAGGAGGCACCCGAGGTCAAACCGCTC
GAAGTCCCCGAGGATTTGCGGATCCCAACCCTGCAGCCAGACCCCCTGAA
TCCGCTGGCCACCATGATGTCTTTCAAGCTAATGGCTATGGACGTAGTAA
CTCAAATGCAGACCGCCCTGCACAAGTGCGTCAACGCCCAGAGTCCGCCG
GGCGCCAAGATGGCGGGAATCGAGTTGGACGCCTTGCGGCGTTGCGTACC
GTCCTCGTGCTACTTCTTTATTGACCTGCATCCGCACCACGGCTTTAAGG
ATACCGCGGAGGATTGCCCTACTAGTCAAGCCTCCAGTGACCGGAATAAC
AACGCTGGCTGTTCGCAAGGATCGGCTGCCAAGAGCTCCTGGCAGCGGCA
GCGTAGTATTTCCGAGTGCAGTGAGGACAGCTTCATTTGCTTTGAGGACG
ACGCAGAGCAGGCGGATGAGGATGTCGAGGAAGACGAGGATGATGATGAC
GACGACAGCAGCGTGCAGTTTACAGCATGCGGTGAGGATGAAAATACCGA
GGAGCTAAAGGCCTGCCAGTGCAGCGACGACAGCTCGACTCCTGTCAAGA
AAGTTCGTTTCAACATGAAACCCGAAGTTCACGTAATGCTCGCCTGGGAC
TACGCTTATCGGGCTGCCAGAAAGAGCGAATGGCAGGTAATGGCGCGAGA
TCGGGATCGCTTTCAGCAGCGGATTCGGCGGATTTCACCCATTCTCAATG
CCGTCCTGACTCCAGTTCACCGAGATCGTGTCTACCAAGCTCGATTCTTG
CACGAGGACGCAGCTTTCTAGACCAT
FMO02243.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gadd34-RA | 1597 | CG3825-RA | 365..1315 | 9..959 | 4740 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23976149..23976891 | 751..9 | 3715 | 100 | Minus |
| 2R | 25286936 | 2R | 23975881..23976087 | 959..753 | 1035 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:35:21 has no hits.
FMO02243.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:45 Download gff for
FMO02243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3825-RA | 380..1343 | 1..965 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:04 Download gff for
FMO02243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gadd34-RA | 357..1320 | 1..965 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:46 Download gff for
FMO02243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gadd34-RA | 357..1320 | 1..965 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:46 Download gff for
FMO02243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23975876..23976087 | 753..965 | 99 | <- | Minus |
| 2R | 23976148..23976898 | 1..752 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:04 Download gff for
FMO02243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19863399..19863610 | 753..965 | 99 | <- | Minus |
| arm_2R | 19863671..19864421 | 1..752 | 99 | | Minus |
