FMO02247.5prime Sequence
1214 bp (1035 high quality bases) assembled on 2008-05-06
> FMO02247.5prime
CAGTCGACATGGCGGAGGCTAAATCGGAGAAGTCGCCTTTTATTGGCAAA
CAGCAGGCGCCGGTGACGTTAAATCCCTCGTGGGAATCCAAGTTGCCGCC
CCATGATTCCAACGGCAAGGGATCAACGTCGGTGTTGGCGAAACTGGGCC
TGCCAGCGCCAAAAGATAAATTCCTTATCGTGTTCTTTATATTCCTGCTG
CACGGCGTGGGCACGCTGATGCCATGGAACATGTTCATCACGGCCAAGTC
CTATTTCGAGGACTTCAAGTTCGGACCAAACAACACCGTGGCCACGGAAG
TGAGTTACCGCACCCATTTCATGCAAAATATGGGCTTTGCCTCGCAGATT
CCTAACCTGGTCTTCAACTGGCTGAACATCTTTGTCAACTTTGGCGGCGA
CCTGACCACCCGAATCGTCTACAGCATCATCTTCGAAATGGTCATTCTGC
TGGTTACCATTATTTTGGCCATGCTCGACTCCTCGCAGTGGCCGGGCGTC
TTCTTCTGGACCACCATGGTGTGCATTGTGTTGTTAAACGTGTGCAACGG
CATCTACCAGAACACCATATACGGAATAGTGGCATCGTTGCCCATCAAGT
ACACAGGCGCCGTCGTCCTGGGCTCCAACATCAGCGGCTGCTTCACCACC
GCCATGGCCTTGATATGCGGTGAGATCTTCTCGTCCAAGAGGACTTCGGC
CATCTACTACTTCGTGACCGCCATCCTAGTGCTGCTGCTCTGCTTCGACA
CGTACTTTGCGCTGCCGCTGAACAAGTTCTTCCGGCACTACGAGACCATT
AGCCGGAGCAGCGAAAAGAAATCTGATTCTAAGGCCCAGCTGACGTGCCT
TACTGGCAGATCTTCAAGAAAGCAGCGCCCCAACTATTCACATCTTCCTC
ACGTTTTTCGTCACGTTGTCGGTTTCCCGGCGATTCAGTCGACGTGCACC
GCTCCGACCCAATTTCGTAGTAGCCGGACTACTTTACACTGGTCACTTGC
TCGCGACTTTACGTCTTCGCAATGCTGGGCAGTTTAACACATCATGGGTG
CATGGCGGGTTCGAGGTCCTCTGGGTGCAATGGCTTGATTGGGCGTCATC
CCCTTGTTTGTCAATGTGCACTACGTCCGGCGGGACTCGGTGGCCCTATG
GCGATCTCGGAAAGATTGGGTTACTGGGGCACAGCACTGCAATGTGCCAT
CTAAGCACTCCTGA
FMO02247.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ent2-RA | 2072 | CG31911-RA | 373..1524 | 9..1142 | 5140 | 97.5 | Plus |
| Ent2-RB | 2385 | CG31911-RB | 373..1524 | 9..1142 | 5140 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6562697..6563751 | 9..1052 | 4765 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:58:09 has no hits.
FMO02247.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:35 Download gff for
FMO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31911-RA | 340..1386 | 1..1038 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:24 Download gff for
FMO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ent2-RB | 366..1412 | 1..1038 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:29 Download gff for
FMO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ent2-RB | 366..1412 | 1..1038 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:29 Download gff for
FMO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6562690..6563736 | 1..1038 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:24 Download gff for
FMO02247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6562690..6563736 | 1..1038 | 98 | == | Plus |
