FMO02250.5prime Sequence
1197 bp (1019 high quality bases) assembled on 2008-05-06
> FMO02250.5prime
CAGTCGACATGGATTCTCCCACAACCGAAACGACACCGCCTCCACCCACG
CTATCTGGTCCATTCGTTGGGGCTATTGACGAGGGAACCACTTCCGCGCG
ATTTATTATATTTCGTGCGGGCACTGACGAAATTGTGTGCTTTCATCAGA
TTGAAGTGGAGTCTATTTTCCAGAAGGAGGGATGGTGCGAGCAGGATCCC
ATGGCCATAGTGAATACGGTCAACGAGTGCATCACCGGTGCCTGCAAGAA
ACTTGTGGCCGTGGGCGGGAAGGTTGAGGAAATAATCACGATTGGAATAA
CAAACCAACGCGAGTCCACAGTCGTATGGGATAGAAACTCCGGCCAACCG
CTGGTGAACGCTATCATCTGGCTAGACAATCGTACCACCAGCACGGTGGA
GGAGCTTTTGGAGACTATTCCGAACAATGCCAGGAACATCAACTACCTGC
GCCCATTGTGCGGACTTCCTCTGTCTCCGTACTTTTCGGGCGTGAAACTA
CGCTGGCTTCGAGACAACGTGCCGGTTGTCAGCCAGGCTATGGAGAAGGG
CACGGCCATGTTTGGCACCATCGACACCTGGCTAATGTATAATCTTACGG
GCGGGAAGGACTGTGGTGTCCACAAGACGGATGTGACCAACGCTTCGCGC
ACTATGCTCATGAACATCGAGACCCTTCAGTGGGATGCCAACTTGCTAAA
GTTCTTTGGGCTGCCCAAGACCATTTTGCCGGAGATCTGCTCGAGCTCAG
AGTTCTATGGCAGCATTGCGCAGGGCGTTCTGCAAGGCATAGGCATAACA
TCGGTTCTGGGCGACCAGCAAGCCGCTCTAGTGGGTCAACAATGCCTGGC
CAAAGGTCAGGCCAAAGCCACTTATGGCACTGGATGTTTTCTGCTTTATA
ACACAGGACCTTCAATTGTACACTCAACGCACGGATTACTACGACTGTGC
TACCAACTAGGACGAAGGCAGTCCCATTTACGCCCTTGAGGAAGCGTGTC
ATTGCGTGCAGCATTCACTGCTGCGCGACACATGAACTTATTCAACTCGG
GCAGATCGAAACCATGCTAGCCTGTGACACCTCCTCTTGACGAAACCTCG
TACAGCTCCATGACTCTACGCCCCTCATGAATCGAGCCCTCGGGTCATTG
GGACTGAGTGAGACACAAGTGACCATATGTAGAGCGCACCCTCGTGT
FMO02250.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gyk-RA | 1933 | CG18374-RA | 208..1346 | 9..1124 | 5055 | 97.5 | Plus |
| Gyk-RB | 1713 | CG18374-RB | 144..1119 | 172..1124 | 4240 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 202902..203621 | 991..277 | 3385 | 99.3 | Minus |
| 3L | 28110227 | 3L | 205367..205637 | 279..9 | 1355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:37 has no hits.
FMO02250.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:54 Download gff for
FMO02250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18374-RA | 183..1332 | 9..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:09 Download gff for
FMO02250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gyk-RA | 208..1357 | 9..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:19 Download gff for
FMO02250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gyk-RA | 208..1357 | 9..1133 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:19 Download gff for
FMO02250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 202740..203619 | 279..1133 | 96 | <- | Minus |
| 3L | 205368..205637 | 9..278 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:09 Download gff for
FMO02250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 202740..203619 | 279..1133 | 96 | <- | Minus |
| arm_3L | 205368..205637 | 9..278 | 100 | | Minus |
