FMO02260.5prime Sequence
1187 bp (1017 high quality bases) assembled on 2008-05-06
> FMO02260.5prime
CAGTCGACATGGATAGCACGTCAGCCAGCGTAGTGTATACGAATTCTTTT
TACGCTCCAAATTACTCGGACACCCAGCAGCCACAGCCACAGCTGCAGAC
TCAGCAACAGATGTTCCATGCCAACTACATCGTCGGAACCACATTGGGTT
CTGGATTGGGATTTAATTTTGCACCAGCCCCCATTCCCCAGGCGAGTGCC
GCTTCCGGTTTGAGTCCCAGAGGCATGTACAGTGATCTCTACCGCTACGA
GGATGGAAGCGGCGATGCCAGCGGTTCCTTGCTTCTGGTCCAAGAGGATG
ACCACTTCTGTGGTGCAGAGGCGGACCAGCAGTTGGTGGCCAGCACGTCG
TCCTCATGCCCGATGGCGAGTTCAGGCGAGTCCGTGAGCATTGACACAGA
GCAGGAGGCGGAACGGGATCTTCAGATGAACCAATGTGAGACGCTGGAGC
GGGAAGAGCTGAATGGAGATATAGGGGAAATGGGGGAAATGGAGGAGCTT
GCAGAGGAGGTTAATGGCGAGCAGAGGCCGCCGCTGTTACCCTGCATGGG
TGGCAACACATCCTACATGGTGTTCCCGCGCACCGCCGCCGACTACATGC
CCCGCCTGGCGCTCCCGCGGCATAGGCCCTATATAAGCATCGGTCAGGAG
CAGTACGTGATCCAGGCGGAAACTGTCTTCGTGCTGGGCATGCGCCTCAA
TGTGACCAAGAACGACATCATCCTGTTCTTCGGCAAAGTGGGCGTTATCA
AGATGGACGAGTCGACCAACAAGCCGAAGATCTTCGTCTACAGAACAAGA
TAACGGGGCGCTCCAAGGGTGAGGCCACTATAACCTATGTGAGTCCATTC
TCTGCACAGGCGGCGATTAGTTGTCTGAGTGGGGCCAAGTTCATGGGACA
GTGATCACGTTCTGCCCGCCTACCTATCCACCCGGAGGGGCAGTGTCCGG
TACAGTTATCGCGAGAGCTAATGCGCGGAGCACCAACGTCGCAGCGGGCA
ATGAATGAGCCAGGCATCGACATGGGTGTGCATGCTCTGCGACAGCAACT
TCGTCTGGCGTCAGCTGCAACGATGCAGCGACAGGTGTCCTCCTCAAATA
CAGGAGTTCTGACGATCCCGAAAGACGGTCCTCGCTTGCGCCTACGACCA
TGCCTGTCAAAATGTACTAATTATGATATCCTGGTCC
FMO02260.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 2107 | CG14718-RA | 132..1218 | 8..1076 | 5010 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11700745..11701813 | 8..1061 | 4710 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:55:56 has no hits.
FMO02260.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:01:51 Download gff for
FMO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1218 | 1..1076 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:55:55 Download gff for
FMO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1218 | 1..1076 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:19 Download gff for
FMO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1218 | 1..1076 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:19 Download gff for
FMO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11700741..11701813 | 1..1061 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:55:55 Download gff for
FMO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7526463..7527535 | 1..1061 | 98 | == | Plus |
