FMO02266.5prime Sequence
1207 bp (1024 high quality bases) assembled on 2008-05-06
> FMO02266.5prime
CAGTCGACATGAGCGCCTATTATCGGCGCGCGGCGTTGCGGAAGAAGAGC
CCAAGCCGAGGGTCATCCTTCGAGTTGGAGATGAACGAGTCTGGCTACAC
ATCCTTCCTGGCGCTGCACAATTCCACCGCGGAGACGCCATTTTTATTGG
AGGACGCTGAGGGCGAAAACTGTCGCAATGCATCGAATACCACAACATTC
TTTCGGGGGCTGAACACGCCCAGTGGCCACCAGGAGCAGGACCTTTACTG
GGGCAAGCCCTATCCCAGAACACAGCCCCAAAAGAAATTTTCCGCGGAGG
AGGAGCCTTTCTCTATGACTCCGCGTCTGCAGGATGAGCATAGTCTGCCC
AAGCGACGCAAGAAACACTTTCAATCGCCACACAGTAGCCCCAAGAAGTC
CAAAAAGCTGCTCTTTCCCCACATAGAAGAACCGCCCAAGAATCGCTTCT
ACGGCGGTGTCGAAAAGCTGGATATCGTGGCCAAGCTGGCGCAATGGCAA
CCGGCACTGCAGTGCATACTGCGTCATGTGGGCGCCCACACGCTGGACGT
GATGACCAAGGTATCGCCGGCCTGGAAGCAGGCTGTTTATCGCAGCCAAC
GCGACTTGGAGCGCCTACAGAACCACCGACTCAAATTGAATCTAACCAAA
GAGAATCCTCACGTGCCCAAGCGGTGCAGCCATGTGCCCAAGGCAAACCA
CACAGTGCCATTGCAGACCTCGAACCATAGCAGCCTGGCCAACAGCGCCG
CCTCGCTAATGGACTCGGGCAACTCGAGCATCCACCTGATGGACGTGGAT
GCCGGAAGGGTGCTGCGCGAGCAGACGCAGCGCGTCAAGTGTCCGCGATG
CGGTCGAGGCAGCCTGGTTTTCATAGCGAGGCGGCCAAGTGTGACGAAAA
CCTATTGTCGCAAACTCTGCCTATTGGACGTACAACAGCACATTCCCCTG
CATGACGGGTCGCTCTCAAACGCTTCTGTCCCTGGATCTGACGAGGTCAG
GACTCACGCAGGACGCATATACTTCGCGGATGCACATGTCATCTTGCAGT
TTCGGTTCTGGCGTCACTGTTTGTGCAGTTGCAATCCCGGCGAGCGTTGC
CTGGTCCGGAACTGGACCATCAATCAACTGAGGAATGCCAGGAGCATGAC
TGCCCACGACCGAAACTGTGATATCGAATCCAGGAAGAAACTCTCTCTCA
TACTGGC
FMO02266.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rca1-RA | 1552 | CG10800-RA | 108..1232 | 9..1117 | 5015 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6852422..6853423 | 9..1004 | 4700 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:12:00 has no hits.
FMO02266.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:02:16 Download gff for
FMO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10800-RA | 91..1231 | 1..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:40 Download gff for
FMO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rca1-RA | 100..1240 | 1..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:46 Download gff for
FMO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rca1-RA | 100..1240 | 1..1125 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:46 Download gff for
FMO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6852414..6853554 | 1..1125 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:40 Download gff for
FMO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6852414..6853554 | 1..1125 | 97 | | Plus |
