FMO02268.5prime Sequence
1194 bp (1004 high quality bases) assembled on 2008-05-06
> FMO02268.5prime
CAGTCGACATGCTCCTGCTGATACCGCTTTTCCTGACCCTTTTGGGGGCT
GAGGCCCAGCAATTTGGCAAAGCTATCATGCATTTTGGCAACTGCAACTC
GGTGGAATTCGGTAGGGGCACCTGTATCGAGAAGAAGGACTGCGACTTTT
ATGCCGTAGATAAACTTATGGAATTGGCCAGCAAACAACAGTGCTTCTCC
CGCCAGCGACCCGATCTGGTTTGCTGCCCCCGCGAGACGAATATTATACC
GCCATTGGCACCCAGGATCAGTAATGGGACCACTAATGCCACGAGCAGCA
CCACAACGCTGAAACTGCTGCCTCGCACCACGCCACGCCCACCCAGCGGT
ATCGACCAACTGCCCGAGCATCCGTACTGCGGCTCCGCCTTTTCGTTTCG
CTTGGTCGGTGGTCATAATACCGGACTCTTCGAGTTCCCGTGGACCACTC
TGCTGGAGTACGAGACAGTGAGCGGTGGCAAGGACTATGCGTGCGGCGCA
TCCTTTATCGCCCAGAGATGGCTCTTAACGGCCGCCCACTGCATTCACAC
AATGGGCAGGAATCTCACCGCAGCCATTTTGGGTGAATGGAATCGGGACA
CCGATCCGGATTGCGAGAATGATTTGAATGGCGTACGCGAATGTGCTCCG
CCGCATATCCGGGTGACCATCGATCGAATATTGCCGCATGCGCAGTACTC
GGAATTGAACTATAGAAACGATATAGCCCTGCTGCGTTTATCACGTCCGG
TGAACTGGCTGCAGATGCAGAATCTGGAGCCCGTCTGTTTGCCACCGCAG
AGGGGCAGGTATGCCAATCAGCTGGCCGGCTCAGCCGCCGATGTTTCCCG
GCTGGGGCAAGACCGAGTCCAGCGGCAGCAGCAAGATCAAGCAAAAGGCG
ATGCTGCACATCCAGCCGCAGATCAGTGCCAGGAGGCGTTTACAGGACAC
CAAGATTACGCTCGCCGATAGTCAGATGTGTGCCGCGGCGAGATTGCGTG
ATCTGCATGGCGACTTCGCGACCACTGACGGTAAAGGCAAACACGGCGGC
GCAATCGAAATGTCTTCTGCGCCTGTCTCAATGACGAAACCTGTGCCAAG
CTGTTCGAATTACACCGGTTCACAGCTACTGAACTGGAATTGAAAGACAT
TCCGAGACTATTGCCAATGCACAGACCTCTTCTTGGAACAAATT
FMO02268.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ser7-RA | 1413 | CG2045-RA | 105..1173 | 9..1065 | 4950 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9865971..9866752 | 218..996 | 3670 | 99.1 | Plus |
| X | 23542271 | X | 9865459..9865609 | 70..220 | 755 | 100 | Plus |
| X | 23542271 | X | 9865337..9865397 | 9..69 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:35:38 has no hits.
FMO02268.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:02:19 Download gff for
FMO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2045-RA | 114..1196 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:10 Download gff for
FMO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser7-RA | 99..1181 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:57 Download gff for
FMO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser7-RA | 99..1181 | 1..1073 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:57 Download gff for
FMO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9865331..9865397 | 1..69 | 94 | -> | Plus |
| X | 9865459..9865607 | 70..218 | 100 | -> | Plus |
| X | 9865972..9866838 | 219..1073 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:10 Download gff for
FMO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9759364..9759430 | 1..69 | 94 | -> | Plus |
| arm_X | 9759492..9759640 | 70..218 | 100 | -> | Plus |
| arm_X | 9760005..9760871 | 219..1073 | 97 | | Plus |
