FMO02270.5prime Sequence
1213 bp (1013 high quality bases) assembled on 2008-05-06
> FMO02270.5prime
CAGTCGACATGGCGGTACTCTGGTGGTTGCTCTCGTTGCAGGTGGTGCTG
ATCTTACCGCCCAGTTACCACCTGGCCACGCCCTCCTCCGGGAGCGGTCA
ATTGCGTCGTCTTTGGCTGCAGGATCATTGCAGTGCGGGAATTTGCACGA
ATGTCGTGATTGGTCGCAGTGATTATGTGATCCTATCACAGGCCCCCATT
GGGGGCACCACCATGCTCACCTTTCTGAACTCGAGCATTGCCAAGATACC
GCATTTGTTGTTCGACACCTTTCCGGATCTACAGGTTCTGCGCATGGAAA
ACTGTTCGCTGGAAACTTTCGAAAAACCGCAGTTTGAAGGTGCCAGCAAT
CTGATGAGCTTGTTCTTGGGATATAATCGCCTGAAGGATATACCTAAGAA
TATATTCTTGGGCGCAGACAATCTGGCCACATTGCATCTGCAAGGAAATC
AGTTGAAGCAGCTGGGAAATCATAGTTTCCATGCCTTGAAAGAAGTGAAG
GAACTTTCGCTGGCGGAAAATCAACTTGAGCAAATTTCTCTAGGAGTTTT
TAGCGGCATGAGGAAACTAATGGACCTAAATTTGGCTGGCAATCGATTAG
ATGCTCTACCAAGAGGCGTCTTCGATCGGAATTTAAACCTTACCAAACTA
AATCTGGCCAGAAACCGGTTCACCGCCTTCGAATCGGAACTGTTGAAGCT
GCAGCCAGTATTTACGCAGTTGGATATTTCTGGAAATATCTTCCAGGAGT
TAACACTCAACTTTACCATGCTGGATGTGGCTATAGCTCATAGTTGCGAT
TTGAGGAGGTTGACCGTCTACGGAGTGATCCATGAACTGGATTTGCACAA
CAACTCGCTGAGGGAATGCCACACATTCCACTGGCCGCCAATGTGAGCAG
TCTGGATTTGTCGCACAATCCATTGGGAAACCTTCAGGTAATCCGTGCGT
AGATTCACATCGCTATTGCGTGATCTTTTCTGCCACCGGTGCCCACGAGT
GCAGAGGATGTCAGACAGAGCCATCTGCAATGGTGGATATATCAGAACTC
TAAATACTCGTGGAGATCCACATCTTCGACAGTGAGGCCTGGCGTTTCTA
CCTTTCAGCAGAACACCTGACTGCAATTCTCTGCACCTCTATGTGCTCGT
GGAAGCAAGACATTCCTCATGGAGAATACGACTCGATGTGGAGCAAATAG
TGGATGGCTTGTC
FMO02270.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| alrm-RA | 1717 | CG11910-RA | 109..1260 | 8..1135 | 4965 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25381676..25382673 | 1000..8 | 4730 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:46 has no hits.
FMO02270.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:02:05 Download gff for
FMO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11910-RA | 120..1274 | 1..1131 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:14 Download gff for
FMO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alrm-RA | 101..1255 | 1..1131 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:27 Download gff for
FMO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alrm-RA | 101..1255 | 1..1131 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:27 Download gff for
FMO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25381527..25382680 | 1..1131 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:14 Download gff for
FMO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21207249..21208402 | 1..1131 | 96 | | Minus |
