FMO02272.5prime Sequence
1229 bp (969 high quality bases) assembled on 2008-05-06
> FMO02272.5prime
CAGTCGACATGATTCTTCGCGATATGGGAGAAGCCACAGTGAGAGCTGCA
CTGTTAGCGGTTTTGGGAATCCTGCTGATCGCGGGCTGTGATTGCAGCCA
GCGGTTCAAGTACGAGATCAAGGAGTTCCAGGTGCCGCTGGACCATTTCA
GCTTCCTGATCAACGCCACCTTCAACATCCGGTACTTGTACAACGACTCG
TTCGTGGACAAGAGCAATGCCCGCACCCCGATTTTCTTCTACACGGGCAA
CGAGGGGGACATCGAACTCTTCGCCCAGAATACCGGATTCCTGTGGGAGC
AGGCGGAACGACAGCGGGCTCTGGTGATCTTTGCGGAGCATCGTTACTAT
GGAAAGTCATTGCCCTTCGGTAGCTCCACGTTCAACACCAGCCTGCCGGA
GCACTTGGCTTACTTCACAGTGGAGCAGACGCTCGAGGACTACGCCATGC
TGATCACGTTCCTGCGGAACGATCGCCAGATGCCCGTGGTGGCCTTCGGG
GGCTCCTATGGCGGAATGCTGGCCGCCTGGTTCCGGATGAAGTATCCGCA
TTTGGTCAACGGAGCCCTGGCAGCCTCGGCGCCCGTTCTGCAGTTCCCCG
GGATAACCGATTGCGACATCTTCTACAGGATTGTGACATCGGTGTTCCAG
AATGCCTACAACGAAAACTGCACCTTGAATATTGCCAAGTCGTGGAAACT
CTTCGAGACTCTGGGCGCCAGCGAGGCCGGCAAGAAGCAGATATCGGATG
CATTCCACCTATGCAATGCCCTGAAGAACGACGACGATCTGAGAAGTTCC
TGGACTACGTGGAGGAGGTGTACAGCAATCTCGCCATGGTCAATACCCGT
ACAACAGCAGTTTCCTGGCCCCATTACCTGGCTATCCCGTGAGGCAGTGT
GCTACTACCTGAAGGAGCTGCATTTCACCGACGCCGATTTGCTGCACGGC
ATGTCCAGGCGCTTTGGCTGTTTACACCACTACACACAGTCCGCCAGTGC
TCGATATATCCGTCACTCAACGCGATGACTCGGTTGAAATATCAGAAGCT
GCAACAGAATGGTGAATGCCCATCTGCTCATGGCTCGAAACATGTTCCGC
AGCGTCCGCTTGACTCAGATAACCGGAAGTGCTCAAGAAACTTCGGTCTC
CCCCAGCCATACGAACTAGTCTGGTCATATGGCGGGCGAAAGCCTGTGAG
AGGCGTGCACACACAACATCTACTTGCTA
FMO02272.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2493-RB | 1677 | CG2493-RB | 75..1184 | 9..1107 | 4985 | 97.7 | Plus |
| CG2493-RA | 1860 | CG2493-RA | 75..1184 | 9..1107 | 4985 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20462359..20463370 | 1015..9 | 4655 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:11:13 has no hits.
FMO02272.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:02:08 Download gff for
FMO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2493-RA | 72..1196 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:28 Download gff for
FMO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2493-RA | 67..1191 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:25 Download gff for
FMO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2493-RA | 67..1191 | 1..1113 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:25 Download gff for
FMO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20462359..20463375 | 1..1015 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:28 Download gff for
FMO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20462359..20463375 | 1..1015 | 98 | | Minus |
