FMO02291.5prime Sequence
1181 bp (996 high quality bases) assembled on 2008-05-06
> FMO02291.5prime
CAGTCGACATGGACGAGGAATTCTCTAATCAGCCCATCGATCCAAGCATC
GCTCGGAGTGACTACTCCCGGAGTCATTTCGTTAACCAGAGCTCCATGAC
ATTGAGTCGCGGATTGGACTCCACCCGACTGCTTTTCGTAGGCGAAAACT
TCCAGCAGACGCGCAGCGAACAGGACTTATTTTACGACTGTCAAGGTCCG
GGTGAGGACTCGCCAAAGGAGGGCCGTAGTGCCACCAGCCGGTGCAAGTT
CGATGATCCGGCTGCGATACGGGATGCCCTGGAACGGGCGGCCAATGCCA
CACAGATGCTACTCAAGAATTTTGACAAGTCAGGTGGTTGGAATCAGCCA
TGTGCCGTCACCCTGGAGTTGACCGCTCGGTTGGTGGACCCCAAGAAGGG
TCGCGCTGGTTGTCCGTTGCACGGAAAGCCCGTCACCGTCCAGATGCCGC
TGGAGTTCAATCCGCAGAGCGGCAAGATGGTCAAGTGTCAGCAAAAGAAA
CAACCGGTCACCAGGCATCGCAAAGAGTCCATCTGCCAGTGCCGCTCGCA
GCAGTATATGCGTTCCGGTCCAAGGGCTCCAAAGCCCAGCTCAGGTAAAT
CCGCCAGCAAACACTTTCGTCCATGTGCATCGCAACAGCTAGCCGAAGGG
TCCGCCAGTTCGGTATACATAGGAAGCTGTGGGGATTCAACATCTCAGTG
TAACCGTTGCACTCCGGCCACATGTTGCCGCTGGCACGACCCGGGGGCAC
GGGAGGTCATCTCAATCTCCTGCCTGACCTTGCCGGATATCGAATCAGAG
CTCACTCTTACCCCAGTGCCTGAGCCACTGCCAATTGAAGAACCGTTGGT
GGAGATAGAACCAACGGCCCCGAAGGAGCACTTGATATCTATGCTCCAGA
GCCGGAACACCCGATCACCGAGTCGGATGATTCGATGAGCTCTTGTCTAG
CGAGCAGGAGATGTTAGACCGCAGCCGAAGAAGAAATGGGACGCCGCCGC
CGGAAGATCGCCGGAAGCAAGCGGTACTACTTGCCCTGCCTCAAACAGAG
TCCTCCACTGTCGCCGTCGTCGATCAGTCTATATGACGAGAGCAATGGTT
TTGGTCCGCACTGTGCTGCGCATGGTCATGACTCACACGCTCTCTGCCCA
ACGAACCACAAGGTCAGTGTGCCGAAGGCTA
FMO02291.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33191-RA | 1545 | CG33191-RA | 88..1159 | 9..1067 | 5015 | 98.6 | Plus |
| Pif1B-RB | 4148 | CG33720-RB | 96..681 | 9..594 | 2930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8778792..8779836 | 1045..9 | 4810 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:59:12 has no hits.
FMO02291.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:02:43 Download gff for
FMO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33191-RA | 81..1147 | 1..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:03 Download gff for
FMO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33191-RA | 81..1147 | 1..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:02 Download gff for
FMO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33191-RA | 81..1147 | 1..1057 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:02 Download gff for
FMO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8778792..8779840 | 1..1045 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:03 Download gff for
FMO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4604514..4605562 | 1..1045 | 98 | | Minus |
