FMO02293.5prime Sequence
1180 bp (949 high quality bases) assembled on 2008-05-06
> FMO02293.5prime
CAGTCGACATGCGTGGACAACTGTTGCTGAAGGGACCCGCATTGGCGAGG
AGCTTGAGCCGGTGCCGCGTAAGTGCCGTGCCCCAAATTGGATCTGTTCG
TCATGTGACCGCCGGCTGTGCAGCTGGTGATACCGTCAAGGGCGGCAAAG
GAATCGTCTTGGGCCTCTACGAAAAGGAGTCGGGCAAGGGACCTCGATTA
ACGCCTGCTGGCGAAAAGTTTGACGATCGTGTGCAGGGCAAGCTATCGGA
ATTGGTTTGCGAAACCAAATTAACTGGACGATTGGGTCGCGGCAAGGTCT
TCAACAATGTGGACAGCGAGTTCAGATCCATTTGCGTGGTGGGCGTTGGT
CTCGAAGGCATAGCCTTTAATGAACTGGAAATGCTGGACGAGGGTATGGA
GAATGTGCGCATAGCTGCTGGAATCGGTGCCCGATCATTACAAAGTATTG
GCTGCTCGGAAGTGCATGTGGATAATATGGACTATGCCGAACAGGCAGCC
GAAGGTGCTGCACTGGCCATTTGGCGATATGAGGAGAATCTGGCGAAGAA
GTATCGTAGCACTATACCGAAACTGGAGCTGCATGGTTCACCGGATGTCG
AGTCCTGGACAAGGGGCCTCTTCAAGGCAGAGGCACAGAATTTGGCCAGA
AGACTGTGTGATGCCCCAGCCAATTGTATGACACCGACAATTGTGGCACA
GGCTGCAGTGGATTCACTATGCCCATGCGGCATCACCGTAGAGGTTCGCA
CCATGGAATGGATTGAACAGCAACATCTGAACTCCTTCCTGATGATTGCC
AAAGGCAGTTGCGAACCACCCGTTCTCCTTGAGTGGCCTATTGCGGCACG
CACCGGAAGATAGCCCATTCTGCTGGTGGGTCAGGCATAACCTTCATTCA
GTGCATCAATCTGCGTCCATGCAGGCATGATGATCCGCGAGATCTCACTG
AGCGCATGCATTTCGCGCATGCCGCAGCAGCTGCTCTATCTTGCCATCAT
ATACTGCTGTGATCCACTGTGGCGAAATCTGGCGTCTGATGTCTGCAAGC
TGCGAATTTGTGACTACTCAATCAATCTCTGGCGGGCTTATTAAGTCCAC
GAATGCGTCATCCGGATTCAGCTTAGCCATAACATCAGCGAATCGTCTGA
ATTGCCATGGTCAAGGTCTAAGAGAGATCT
FMO02293.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| S-Lap3-RD | 2640 | CG32063-RD | 178..1288 | 9..1085 | 4630 | 96.2 | Plus |
| S-Lap3-RC | 2146 | CG32063-RC | 178..1288 | 9..1085 | 4630 | 96.2 | Plus |
| S-Lap3-RB | 2520 | CG32063-RB | 552..1662 | 9..1085 | 4630 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10466512..10467433 | 9..923 | 4265 | 99 | Plus |
| 3L | 28110227 | 3L | 10491331..10491958 | 199..826 | 530 | 72.3 | Plus |
| 2R | 25286936 | 2R | 13779139..13779696 | 833..276 | 390 | 71.3 | Minus |
| 2R | 25286936 | 2R | 13597423..13597691 | 565..833 | 310 | 74.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:35:44 has no hits.
FMO02293.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:02:50 Download gff for
FMO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32063-RA | 368..1414 | 9..1031 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:12 Download gff for
FMO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| S-Lap3-RB | 552..1598 | 9..1031 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:01 Download gff for
FMO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| S-Lap3-RB | 552..1598 | 9..1031 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:01 Download gff for
FMO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10466512..10467558 | 9..1031 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:12 Download gff for
FMO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10459612..10460658 | 9..1031 | 97 | | Plus |
