FMO02311.5prime Sequence
814 bp (814 high quality bases) assembled on 2008-05-14
> FMO02311.5prime
CAGTCGACATGCGTGCCACAGTGTTTTTTCTCGGCCTCTTGGCTATCAGT
TACTGGGAGGAGTCCCATGGTCATGTTGTGCCCGTGGGTCTTCCTGCAGT
CGGAACCTATCTGCTGTCTCCACCCGTTGTCTTGCTAGTCCAGCCACCTC
CTCCTCCGCCGGAAGACGATGGCTCCTACAAGCCGCCTTCGCCCCCCGAA
GATGGCTCGTGGCAGCCACAGCCTGGTCTGGAGGGAGAGTACTCGGACCC
GGAACTAAGCCAGAGTGGCAGTGGAAGCATTACAGCCAGTGACGCAGGAG
CTGCTGCCCTGAGTTTGGTTGCCTCACAATCTGTAGACGCCCAAGATGCC
CCTGCTCCGGCGGAGGCCGGTGGAGCAGGAGGTGCCGGACAAGCGGGACA
GGCTGGAGCACTTCTAGGCGGAGCGGGAGGAGCAGGTGGAGCTGGTGGTG
GAGGCAGCGCTGGAGGCGGTGGCGGCGGAGGAGGCGGCGGCGGTGGCGGA
ACGGCCACATCCGGCCAGAGCGGAGACAGTGGCCAGCCCGGAGCGCCGAG
TCCAGCGGGTCCTCAGCCCGATGGCGAAGATGGCGCTGATGGAGCCGATG
GGCCAGACGGTCCGGATGGCTCCAAGGGTGGAAAAGGCGGCAAGGGTGGA
AAGGGAGCACGCAATGGAGCCGGAGGCGGTGGTGGAGCTGGAGGAGCTGC
TCCCCAGCCGGCGCCGGCAGCGATTCCTGTTCAGGCGGCTGTCCTGATTC
CCGCACCCGTTTGGGCTGATCCAGAGCCAATGCGATTCACGTTGTGGCAA
GCTTTCTAGACCAT
FMO02311.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4000-RA | 999 | CG4000-RA | 70..858 | 9..796 | 3920 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20676449..20677206 | 780..23 | 3790 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:00 has no hits.
FMO02311.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:02:53 Download gff for
FMO02311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4000-RA | 71..862 | 9..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:22 Download gff for
FMO02311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4000-RA | 71..862 | 9..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:35 Download gff for
FMO02311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4000-RA | 70..861 | 9..800 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:35 Download gff for
FMO02311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20676436..20677205 | 24..792 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:22 Download gff for
FMO02311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16502158..16502927 | 24..792 | 99 | <- | Minus |
