FMO02314.5prime Sequence
1200 bp (1019 high quality bases) assembled on 2008-05-14
> FMO02314.5prime
CAGTCGACATGGACGACGATGAGCTGATTAAATTGATAGAGAGACACCCG
ATCCTGTACGACAAGGACTGCGCGAGGAGCGTGAAGAATGCGGCGCAAAA
GGACGCGGCCTGGAAGGCCATCTCCCAGAAGTTAGGAGCCTCGGAACGGG
CGTGCATTACGCGCTGGAAGAGCATTCGCGATCGTTTCGGCAAGGAGTTT
CGCCGTTTCCAGGAGCGTCCGGATGAGCCCACCTACTGGGACATGTTTCC
GCGACTGCTCTTTCTCAAGGATCACTACAAACAGGGACTGGCAAGGAACG
AGAGTCTCGACGGGATGCGTTTTGAGCCCAGGGAGCGGAAAAAGCGCACA
AAAGTGGACATGGAGCAGGAGAGGCGGAGAAAGGACGAGGAGGAGGAGGA
CTCCCAGGATGACCTGCTGAACGAGCAGCTCATTGAGCTGGTCAAGTCTC
ATCCCGTGCTGTATGATCGTCACAAGATCAGAGTCTCCAAGAACCTAGCA
GCGAAAAACGAAGCCTGGCGAGAGATTTCTGAAAACCTAAATGTGTCGGA
GGAACTTTGCTACAACCGCTGGAAGAAGCTGCGTGATCGTTTCGGGCGGG
AGTTCCGCAGTCATCAGATCAACCAGTCCACGCCCATCACGTGGAGGTAC
TTTAACGACCTTCTCTTTCTGGGCCGCCACTTCCGCAAAGGAGTGCCCCT
GGTTTTGGAGAACATCAAGCGACGTGGACGACCACCCAAAGCATGAAATC
CTTCGGGAAAGACCAGCAAACAGCCGGAGGGAATGGTGATCTCCAGTGGT
GAGCAAATCTGGGGCGCTGATTACCCCTACAGTACGGACACGACGATCTG
GAGGATGATCTTGAGTTGGCCTACGATGAAGAGATTGAGATACTATCGGA
GGCGGAGCAAGCACGCCGTTCGATTTTTATCCTCAGCGAAGCGACGGCAC
GGCAGGACTTGGAGCCACCACAGCAGCTCCAGGTGACCACCACCACGCCG
CCACCAGTGAGAATAATTCACACAATCCGCAAGGGTAAATCCCGTCGTAG
AGAGTCCTCCCTCCTCTCCCTGGGGACTCTTGTACGTCTGCGCATCTTCC
GACCAACTGTGACCACGTGAATGCACATGAGACCTGCTCGCAATCGGAGC
GTGCAGGCCAATCCACCGAACGGGAACGGGAGCAGAATACGGCGTAGATT
FMO02314.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10949-RB | 1689 | CG10949-RB | 215..1335 | 9..1124 | 5145 | 98 | Plus |
| CG10949-RA | 1539 | CG10949-RA | 65..1185 | 9..1124 | 5145 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20416164..20416704 | 549..9 | 2705 | 100 | Minus |
| 2L | 23513712 | 2L | 20415574..20416107 | 1080..549 | 2200 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:04:54 has no hits.
FMO02314.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:12 Download gff for
FMO02314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10949-RA | 209..1312 | 1..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:23 Download gff for
FMO02314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10949-RA | 59..1162 | 1..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:00 Download gff for
FMO02314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10949-RA | 59..1162 | 1..1103 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:00 Download gff for
FMO02314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20415550..20416106 | 550..1103 | 96 | <- | Minus |
| 2L | 20416164..20416708 | 1..549 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:23 Download gff for
FMO02314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20415550..20416106 | 550..1103 | 96 | <- | Minus |
| arm_2L | 20416164..20416708 | 1..549 | 99 | | Minus |
