FMO02317.5prime Sequence
1212 bp (1026 high quality bases) assembled on 2008-05-14
> FMO02317.5prime
CAGTCGACATGTTGGGTGTTCTACGTATCCAAGGAGCGTTGGCTTCGGCG
GGGCAGGCGCGTCTTCTGTCCGTCCGCCTGCTGGCCAGCAAATCCACCAC
TGACATGACCACAAACCGCGGTGAATCCACACAATCGACGTCCACCGAAC
ACTTTGATATAATCATCGGAGGCGGCGGACTGGTGGGCACCACATTGGCC
GCAGCTCTGGCCAAGAACTCGACGTTGGCGGACAAGAAGGTACTGCTGCT
GGAAGGTGCGCCCGAGTTCCGGGGATTTAATCCCACTGGGCCATACCAGA
ATCGCGTATCCGCCATCAATCACAACTCCATCGAGCTGTTCAAGTCCATT
GATGCGTGGAAGCACATCGAGTCGGCGCGCTACAAGCCCGTCAAGCAGAT
GCAGGTGTGGGAGTCCAACACGGACGCACTGATCCAGTTCCAGCACGATA
ACTTTGCCAGCGACGTGGCCTGCATCATTGAGAACGATTTGATCCTGGAT
GCGGTCTATGCGCTGGCCAAGGAATCACCCAATGTGGAGATCCTCAACAA
GGCCAGAATCCAGTGCGTTCGCCTGCCCAGGGACTCCAACTCCAATCACT
CCGAGCTGCAGCTAGAGGATGGACGCAACTTTTCCTGCGATTTGCTGATC
GGAGCGGATGGCGCCAATTCCGTGGTCAGAAAGGAGATGAACGTGGATGT
ATTTTCCCTGAACTACGACCGCATGGGCCTGGTGGCTACGCTGGAACTCG
GCGAAGATGCCTGTGATAATTCCGTGGCGTGGCAGAGTTTCTGCCCAATG
GACCAGTGGCACTGCTACCACTAACGGACAGGCTGAGCTCCCTGGTCTGG
AGCACCACCAACGAGCAAGCGAAAATGCTGCAAGCCCTACCACCCACAGA
ATTCGTAGACGCCCTCAACGAAGCCTTCTGCGGCAGTATCCGCGCGTTGA
GCTCGCAGACAGCTGTCCAGCGCTGACTCCTTGTTTGGACCAACGGCAGC
AGCACCAGTGCAATATTCCGCCACGGGTGTTGCGGCGTGCTGACAGTCGC
GGTGCCGTTTCATTGGGTTTCCTGCCGGCTCGTCGTACGTGGCATGGACA
CTCTGTCCGTGATGCCGCCCATCGAGGCCACCCCCTCGCGGCAAGGCTCA
TTGACTCACGGAGTGTGCGGATTCTGGGTGGAATTCCATGGCCCCGGGTT
TATATCACCCCG
FMO02317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1604 | CG7277-RA | 77..1224 | 9..1139 | 5110 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5531107..5532147 | 1042..9 | 4700 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:17:29 has no hits.
FMO02317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:16 Download gff for
FMO02317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 49..1204 | 9..1146 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:32 Download gff for
FMO02317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..1232 | 9..1146 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:53 Download gff for
FMO02317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..1232 | 9..1146 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:53 Download gff for
FMO02317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5530992..5532147 | 9..1146 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:32 Download gff for
FMO02317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5530992..5532147 | 9..1146 | 97 | | Minus |
