FMO02320.5prime Sequence
1202 bp (1054 high quality bases) assembled on 2008-05-14
> FMO02320.5prime
CAGTCGACATGCTCAAGTCGGAGGTTCAGCACCAGTTCTGGATTACCAAA
AAGGTGGTGCAGCGCAAGCTCGGAACGAAGGAGGACAAGCACATAATATC
CTCGGACGCGGAGCTGGATTCCAAGATCGAGGTGTTCAAATCGATATCGG
ACACCAGCTTGAACCTGTGCAAAATCATTGACCAATACCAGGAGCGCCTA
TGCATCCTGTCGCAGGAGGAGTGTGTGTTCGGCAGGTTCCTCAAGGAGGC
GGGAAAGCGGAGCAGAACCACGGGCGGTAGTATCGCCCACACGGCCAAGG
CCGTATCCTTCGCTGGACAACAGAGGATGTGCGTGCGGGTGCCGCTCCTG
CGGCTCCAGCACGAAGTCGATGTGTTCCGCTGCCGGGCGATAAAGGACAC
GGAGCAGACCCTCCAGACGATGGAGAAGGAGCGCACGGAATACCGCGCCG
CTCTCTCCTGGATGAAGTCCGCCAGCCAGGAACTGGATCCCGATACGGGC
AAGGGTCTGGACAAGTTTCGCACGGCACAGGCCCACGTGCGGGTGGCCAA
GCATAATTTCGATGGTTACTCAATGGATTCCATTCAGAAGATTGATTTAC
TAGCAGCTGCCCGATGCAACATGTACTCCCATGCTCTGGTGGCCTACGTT
ACCGAGTTGAAGAACTTTGCCCAGAAGGCCGCCTCCACATTCCAGACCAT
ATCTAAGGCCTTGATTATAAAGCCCAAGTACGACTTCTGTGTGCTAAAGG
AACTGTCTCAAAATGAAGGATCCACAGAGGAAGTGCCGCCAATCGAAGCC
GTGGATAAGGACCAGTCGTTATTCTTTGCTAACGAGTACCAGGACAAGCT
GGAAACCCAGCCGGAAATCAAGGAGTCCGAAGAGGACAAACCAAGTGCAC
CTCCCAATGCCTGCGGCGACATGAATCCTTGCTTATTGAGCTTTCCAAGC
AGCTGGAGGACAGTCTCTATAGATGCGCCGCTGGATGAAGATATACCTGC
CCAAATAGCACTAACAGCTATGGTCCCGCTTGTTTAGCCAGCAGATTCAG
CAACCCATACGAGCAGTAGCCACGGACTCGAAGCAGTGCAGTGGGCACCC
GGTTTCCAGCAATCCGGACCACAACATCCCTTGCCTGATTTTCCCGACTG
GATCATAGCCAATCGCAGCTCGAATTTAACTGAACGCGGAACCCATGTGT
GT
FMO02320.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10566-RB | 1462 | CG10566-RB | 79..1258 | 9..1164 | 5225 | 97.4 | Plus |
| CG10566-RA | 1735 | CG10566-RA | 352..1531 | 9..1164 | 5225 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21131797..21132378 | 9..590 | 2910 | 100 | Plus |
| 3L | 28110227 | 3L | 21132446..21132687 | 589..830 | 1210 | 100 | Plus |
| 3L | 28110227 | 3L | 21132749..21133009 | 831..1083 | 925 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:57:12 has no hits.
FMO02320.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:20 Download gff for
FMO02320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10566-RA | 352..1456 | 9..1100 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:56:47 Download gff for
FMO02320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10566-RA | 352..1456 | 9..1100 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:55 Download gff for
FMO02320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10566-RA | 352..1456 | 9..1100 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:55 Download gff for
FMO02320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21132749..21133009 | 831..1083 | 96 | == | Plus |
| 3L | 21131797..21132378 | 9..590 | 100 | -> | Plus |
| 3L | 21132448..21132687 | 591..830 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:56:47 Download gff for
FMO02320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21125548..21125787 | 591..830 | 100 | -> | Plus |
| arm_3L | 21125849..21126109 | 831..1083 | 96 | == | Plus |
| arm_3L | 21124897..21125478 | 9..590 | 100 | -> | Plus |
