FMO02324.5prime Sequence
806 bp (806 high quality bases) assembled on 2008-05-14
> FMO02324.5prime
CAGTCGACATGTTGTACTCCCACAACCCACACCCACACCCGCACCCGCAC
CATCCAGCAGCCCAGCAGCACCACCATCAGCAGCAGCACGAGCAGCAGCG
TTTGCTAAAGAAGCGCCAGCATGCCGAGCAGACGGCGGCAAAGAATCCGC
GCGCTGCTGCGGCTGCCGCTCATAAAATGGCCGAAGTAGAGCACGCCTAT
CTATCGAATTTGTATGGCAAGGCGGCGGCCAGCATGCTAAGTCCACCCAT
GGGCAATGTCATGCCCGAGTGGGAACAGCAGAGGCAGCGAAGGACACAGG
CGGCAGCACCAACGCCGCCCCACCAACCGCAGCAGCATCCGCATCAGCAG
CAGCAAACGCAGCAGCAGCAGCAGCAACCGGCGGCTGCAGCGGCAGTGGC
GGCGCCACCCCAACGGCATATAATGCATCGCCGGCATAGCGTGTGTGCCG
CTGGACTGGCCAGCCTGTCGCCAGCTTCCTCGACGCACTCCTCATCGACG
GCTTCGTCAACAACGGCGGCGGCAGCTGCCCTGGCCGCCGCATCCTACTA
CGGCAGTGCGGCGGCAGCGGCGGCGGCGGCATTTACGGCACCATATCAGC
ACCATCATCATCATCATGCGGCAGCGGCTGCTGCGGCGGCACATCATCAT
GCTGCAGCAGCAGCGGCAGCGGCGGCAGCAGCGGCGGCCCATCATACACA
TGGTCAGCCATCGCCCACCATATATCCACCCACTCCGCCGCCATCGGCGC
CGTGGGTGCATCCATGGTATGCTGGCGATGCGGCCTTCGCAAGCTTTCTA
GACCAT
FMO02324.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43736-RL | 7668 | CG43736-RL | 5156..5939 | 5..788 | 3875 | 99.6 | Plus |
| CG43736-RI | 7387 | CG43736-RI | 4875..5658 | 5..788 | 3875 | 99.6 | Plus |
| CG43736-RG | 5533 | CG43736-RG | 3021..3804 | 5..788 | 3875 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6879068..6879851 | 5..788 | 3875 | 99.6 | Plus |
| X | 23542271 | X | 12691034..12691093 | 391..332 | 195 | 88.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:10:07 has no hits.
FMO02324.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:09 Download gff for
FMO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33692-RC | 755..1547 | 1..794 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:30 Download gff for
FMO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43736-RF | 3299..4091 | 1..794 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:39 Download gff for
FMO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43736-RG | 3017..3809 | 1..794 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:39 Download gff for
FMO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6879064..6879856 | 1..794 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:30 Download gff for
FMO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6773097..6773889 | 1..794 | 98 | | Plus |
