FMO02327.5prime Sequence
1200 bp (1032 high quality bases) assembled on 2008-05-14
> FMO02327.5prime
CAGTCGACATGGCCATGTACCGCGCCAGTGGGTTAAGGATTATGCAACAG
ATGCGACGCAGGATTCCCGTCGAACTGCAGCCACTCCAAGTGGCCAAAGC
TGCGCCTGCGCTGCAAACTTTCACTTCTCAGCGCTGGACTTCGACGACGA
CGACCAGTGGAAAGCATGCCAGTCCACAGGTTACGACCCCGCCCCCGAGA
CACGACTGGAATAGGGCGGTCAGCGAGGCGGAGCGCATCGTCGGCTATCC
CACATCCTTCCTCAGTCTGCGCTGGCTGCTCAGCGACGAGATCGCCAATG
TGGCGCTGCACCTGCGCAAACTGGTGGGCAGCGCCCATCCGCTGATGAAG
ACGGCCAAGCACCTGCTCTACAATGGCAAGAACACGATGCAAGCCTGGGG
ATTGATAGTGCTCCTGGTGTCCAAGGCCGCAGGACATGCACCCAGTGTTC
CAGACGTGGAGCAGGACAAGAGTGCCGGAGTGCTGCACTCCCAAAGGGCT
TTGGCCGAGGTCACCGAGATGATACGGATATCTCATCTGGTGCACAATAG
CGTGGTTAATCTGCAATCGAGCACGCAGGCTGGGCAGGATGTGGACACCT
ACGACGACATGTCGTTTGGCAACAAGATCGGCCTGCTGACCGGCGACTAT
CTTCTGGGCCATTCCAGTGCGGAGCTGGCTAATCTGCGCAACCAGGAGGT
GGTGGAGCTGATCTCGTCGGCGGTGCGAGATTTTTCCGAGTCGGAATTCA
TTGGAGAGCGTGATGAACAGAACAACCCGCTGCCTTATAAGCCAGGAACC
TTCCAGCGACCATCTCTCAGCGTTGGAGTGGATTTCAACGAGCACGACGT
GATGACGCCAATGCCGATTGCCCAGGTTCTCGGCAATCCGGAGAGGAATG
GGAGTGCCGTAATATCCTTATGCGGGTAGCCTGCTGGGCAAATCCTGCCA
AGCTTCGCTAAAGCTGGCCGGACGAGTGAGACTGCAGCGACATGCTTACC
GCTTTGCAAACATTTGCGCTCGCTGCAGCTTGCTGATGCGACTTCATGCC
CCCACTGCCGCTAGATGTACTTTCATCTGGTTATGCCTCCAGTCTATCCA
CTGGAGACCGACCTGCATGTAATCTCCAATTGAAGCTGAACGTCGGTCGA
TACTCGCACTACCACAAATCCAAAGGCCATCTTGGGCGCGGGCCGGCTGA
FMO02327.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10585-RB | 1699 | CG10585-RB | 103..1323 | 9..1198 | 5060 | 96.1 | Plus |
| CG10585-RA | 1990 | CG10585-RA | 394..1614 | 9..1198 | 5060 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21029085..21029558 | 549..1016 | 2105 | 98.7 | Plus |
| 3L | 28110227 | 3L | 21028308..21028658 | 9..359 | 1755 | 100 | Plus |
| 3L | 28110227 | 3L | 21028716..21028905 | 359..548 | 950 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:35:56 has no hits.
FMO02327.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:28 Download gff for
FMO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10585-RA | 414..1535 | 9..1106 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:17 Download gff for
FMO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10585-RA | 394..1515 | 9..1106 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:09 Download gff for
FMO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10585-RA | 394..1515 | 9..1106 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:09 Download gff for
FMO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21028308..21028657 | 9..358 | 100 | -> | Plus |
| 3L | 21028716..21028905 | 359..548 | 100 | -> | Plus |
| 3L | 21029085..21029666 | 549..1106 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:17 Download gff for
FMO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21021408..21021757 | 9..358 | 100 | -> | Plus |
| arm_3L | 21021816..21022005 | 359..548 | 100 | -> | Plus |
| arm_3L | 21022185..21022766 | 549..1106 | 95 | | Plus |
