FMO02329.5prime Sequence
1192 bp (1045 high quality bases) assembled on 2008-05-14
> FMO02329.5prime
CAGTCGACATGTGGATCGCTCTGCTGGGGATCCCGATTTTGTTGGCGGTC
CTAACGCTTCTTCTAAAACACATTAACAAAACCTACTTTATACTTTCATT
AACGAAGCGTGTGCGAACCGAGGATGGCAGTCCATTGGAAAGCAAAGTGG
CCATAATGCCGGGAAAAACGCGATTTGGCAACAACTTGGATATCTTGAAC
TTTACGCCGGCTAGTGTTTTTAATTTTGTGCGCGAGTCCACGGCCAAGGC
CAAGGGTCAGAATTATCTGTGGTATTTTCTATATGCACCCATGTATAATG
TGGTTCGACCCGAGGAAGCTGAGGAGGTATTCCAGAGCACCAAGCTGATA
ACGAAGAACGTGGTTTACGAACTGATTAGACCATTTCTGGGAGACGGACT
CCTGATAAGCACGGATCACAAATGGCATTCCAGACGAAAGGCTTTAACGC
CCGCCTTTCACTTCAATGTCCTGCAGTCATTCCTGGGTATTTTCAAGGAA
GAGTGCAAGAAGTTCCTTAACGTTTTAGAGAAAAATTTAGATGCAGAACT
GGAGCTTAACCAGGTTATTCCGCCATTTACTTTGAATAATATATGCGAAA
CTGCTCTGGGTGTGAAGCTGGATGACATGTCGGAGGGCAACGAATATAGA
AAGGCCATCCATGCCATCGAGGAAGTTCTAATTCAACGCGTGTGCAATCC
GCTGATGTACTACAACTGGTATTTCTTCGTTTACGGAGACTATAGAAAGC
ATTTGCAGAATCTTCGAATAGTTCACGACTTCTCCAGTCGCATTATCGAA
CGAAAAAGGCAGCAATTCCAGCAGAAACAACTTGGAGAAGTCGATGAATT
TGGCAGGAAGCAGCGATACGCCATGTTGGATACCCTGTTAGCAGCCGAAG
CAGATGGTCAGATCGATCATCAGGTATCTGCGATGAGTCATACCTTTATG
TTCGAGGGTACGATACTACGTCCACCTGTCTATATTTACCCTATGATGCT
GCTCTCCACGAGATGTCCAGAAGAGTGCTATGAGGAGGTGAAATCTCCGA
GACGCGATGACTCAGTATGTTCAGTCACAACTAGTCTACTGGAATGGTGA
TAAGATCGCGTGAAACTGTTCCCATCATGCATTATTGGGCGCAATGCCTG
AGAGACGTGTGTATGTAATGGTGGTATTGCCAAGGAACCACA
FMO02329.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4ac1-RA | 1666 | CG14032-RA | 34..1230 | 9..1173 | 5080 | 96.7 | Plus |
| Cyp4ac3-RA | 1606 | CG14031-RA | 49..1026 | 9..982 | 1445 | 77.3 | Plus |
| Cyp4ac2-RB | 1709 | CG17970-RB | 193..1088 | 158..1044 | 1100 | 76.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5264855..5265307 | 597..1040 | 1820 | 97.6 | Plus |
| 2L | 23513712 | 2L | 5264295..5264499 | 210..414 | 1025 | 100 | Plus |
| 2L | 23513712 | 2L | 5264034..5264235 | 9..210 | 1010 | 100 | Plus |
| 2L | 23513712 | 2L | 5269360..5269749 | 597..982 | 670 | 80.5 | Plus |
| 2L | 23513712 | 2L | 5267624..5267834 | 843..1044 | 520 | 91.9 | Plus |
| 2L | 23513712 | 2L | 5264696..5264796 | 497..597 | 505 | 100 | Plus |
| 2L | 23513712 | 2L | 5264557..5264644 | 414..501 | 425 | 98.9 | Plus |
| 2L | 23513712 | 2L | 5268546..5268728 | 9..191 | 300 | 77.6 | Plus |
| 2L | 23513712 | 2L | 5268823..5269000 | 234..411 | 290 | 77.5 | Plus |
| 2L | 23513712 | 2L | 5266748..5266896 | 264..412 | 250 | 77.9 | Plus |
Blast to na_te.dros performed 2014-11-28 19:10:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 5065..5144 | 639..717 | 118 | 62.5 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 6521..6600 | 639..717 | 118 | 62.5 | Plus |
FMO02329.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:30 Download gff for
FMO02329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14032-RA | 27..1133 | 1..1088 | 97 | <- | Plus |
| CG14032-RA | 1221..1232 | 1089..1101 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:34 Download gff for
FMO02329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac1-RA | 27..1133 | 1..1088 | 97 | <- | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:47 Download gff for
FMO02329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac1-RA | 27..1133 | 1..1088 | 97 | <- | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:47 Download gff for
FMO02329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5264027..5264235 | 1..210 | 98 | -> | Plus |
| 2L | 5264296..5264499 | 211..414 | 100 | -> | Plus |
| 2L | 5264558..5264639 | 415..496 | 100 | -> | Plus |
| 2L | 5264696..5264796 | 497..597 | 100 | -> | Plus |
| 2L | 5264856..5265361 | 598..1083 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:34 Download gff for
FMO02329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5264027..5264235 | 1..210 | 98 | -> | Plus |
| arm_2L | 5264296..5264499 | 211..414 | 100 | -> | Plus |
| arm_2L | 5264558..5264639 | 415..496 | 100 | -> | Plus |
| arm_2L | 5264696..5264796 | 497..597 | 100 | -> | Plus |
| arm_2L | 5264856..5265361 | 598..1083 | 96 | -> | Plus |
