FMO02330.5prime Sequence
1203 bp (1033 high quality bases) assembled on 2008-05-14
> FMO02330.5prime
CAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGACTCGCCTA
GTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACATCCTTTGCA
AGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGCCGCCTGGC
AGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCGCCGAGTAT
GTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGCCATGTGGT
TATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCAGGGTCAGC
ATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTTGGCTGGGC
GATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATGCGCAAAAT
CATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGTCGAGGTCT
TCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGCTGTCGTAC
GGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCTGCCCTAGA
CATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCAAGGAGCTG
ACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCTTGGCCACC
AGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGCCTGTGCTG
GCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCTCCATGAGT
TTACCAACGGAATTATAGAGCAGCGACGCCGTTTACTGGCCAGGGAGGCT
AATCAAGATAAGCCAACAAAGCCCCACGCCCTGCTGGACACGCTCCTGCG
GGCAACTGTGGATGGGCAACCATTGACTGACAAGCAAATTCGCGATGAAG
TGAACACTTTCATCTTTGAGGGTCACGATACGACGACTTCAGCGGTTTCC
TTCTGTTGTATCTGCTTTCCCGCCATGAGCAGTGCAACAAAAGCTTTTGA
GACTGAGATGCACTACGCCAGATTTATTCAGAGGCGTTATTCTCTTCGAT
TTCGCGACGTTACCGTATCTAGGCTGCTGTCAAGAGTCCTGCGTCTTTTA
TCCGCCCTTATCCGGCCGTCCACGCTGACTGAAAGTATTGGTAAATGAGG
CTACTCCATGGACACTGTTCGTACTTCCTGGCGACCTCTCTCGGGATGAA
AGC
FMO02330.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4ae1-RA | 1822 | CG10755-RA | 89..1224 | 7..1131 | 5235 | 98.2 | Plus |
| Cyp4d8-RA | 1573 | CG4321-RA | 319..432 | 342..455 | 215 | 82.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2179317..2179770 | 175..628 | 2270 | 100 | Plus |
| X | 23542271 | X | 2179826..2180282 | 629..1077 | 1885 | 96.7 | Plus |
| X | 23542271 | X | 2179095..2179262 | 7..174 | 840 | 100 | Plus |
| 3L | 28110227 | 3L | 7494829..7494942 | 455..342 | 195 | 78.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:21:49 has no hits.
FMO02330.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:31 Download gff for
FMO02330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10755-RA | 207..1325 | 1..1111 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:40 Download gff for
FMO02330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ae1-RA | 84..1202 | 1..1111 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:00 Download gff for
FMO02330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ae1-RA | 84..1202 | 1..1111 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:00 Download gff for
FMO02330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2179090..2179262 | 1..174 | 98 | -> | Plus |
| X | 2179317..2179770 | 175..628 | 100 | -> | Plus |
| X | 2179826..2180317 | 629..1111 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:40 Download gff for
FMO02330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2073123..2073295 | 1..174 | 98 | -> | Plus |
| arm_X | 2073350..2073803 | 175..628 | 100 | -> | Plus |
| arm_X | 2073859..2074350 | 629..1111 | 96 | | Plus |
