FMO02332.5prime Sequence
1195 bp (394 high quality bases) assembled on 2008-05-14
> FMO02332.5prime
CAATCCACATGGACGCCACTAACAATGGAGAATCCGCCGACCAGGTGGGC
ATCAGGGTGGGCAATCCGGAGCAGCCCAACGATCACACAGATGCCCTGGG
CTCCGTGGGATCCGGAGGAGCGGGTAGCAACGGCCTGGTCGCAGGATCCT
CGCATCCTTACGGCAGCGGAGCCATTGGGCAGCTGGCCAACGGGTACAGC
TCACCCTCGTCCAGCTACCGTAAGAATGTAGCCAAAATGGTCACCGACCG
CCATGCAGCCGAGTACAACATGCGCCACAAGAACCGCGGAATGGCACTGA
TCTTCAACCATGAGCACTTCAAGGTGCCCACCTTGAAGTCTCGCGCGGGA
ACCAATGTGGACTGCGAGAATCTGACTCGGGTGCTCAAGCACCTGGACTT
CGAAATGACCGTGTACAAGGACTGCCACTACAAGGACATTTTGAGGACAA
TCGAGTATGCAGCGTCACAAAATCACAGCGATAGTGATTGCATCCTGGTC
GCCATCCTGTCGCACGGCGAGATGGGCTACATCTACGCCAAGGACACACA
GTACAAGCTGGATAACATCTGGAGCTTCTTCACGGCCAATCACTGCCCCT
CGCTAGCCGGCAAACCCAAGTTGTTCTTCATACAGGCCTGCCAGGGCGAC
AGATTGGATGGCGGAGTGACCATGCAGCGTTCTCAGACGGAAACCGATGG
CGACTCCTCGATGAGCTACAAGATTCCAGTGCACGCCGACTTTCTGATCG
CCTACTCGACGGTTCCTGGATTCTATTCGTGGCGCAACACCACCCGCGGC
AGCTGGTTCATGCAAGCCTGTGCGCCGAACTGGCGGCCATGGCAAGCGGC
TGGACATCCTGACCCTGCTCACATTCGTGTGCCAGCGGTGGTCGTGGACT
TTGAGTCCTGCCCCCAGACACTCAGGAGATGCACATCATTACCAGATACC
CTGCATACCACATGCTGACGCGCATTCTGCGTTTCAGCGACAGTAGTCGC
TCAGCCGACGGGTGCAGCTTTTCTAGATCATCGTTGTTGCGCGGACCAGT
AGTGATCATAATCATAATCGAATCTAATCTGATTCCACCTAGCCAGGAAT
CTCTCTGACTGAGCCTGGAACTTCCACAATCAAAGCCGGGCACCTGAGCT
TGACGATCCGAAGTGGAGTCTCTGAGTACATTCATCGGACACGTA
FMO02332.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drice-RA | 1927 | CG7788-RA | 240..1231 | 8..992 | 4575 | 97.9 | Plus |
| Dcp-1-RA | 1749 | CG5370-RA | 854..1267 | 497..907 | 450 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29799897..29800888 | 8..992 | 4405 | 97.7 | Plus |
| 2R | 25286936 | 2R | 23552592..23552855 | 497..760 | 405 | 76.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:22:19 has no hits.
FMO02332.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:34 Download gff for
FMO02332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7788-RA | 245..1247 | 8..1003 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:11 Download gff for
FMO02332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ice-RA | 240..1242 | 8..1003 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:47 Download gff for
FMO02332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drice-RA | 240..1242 | 8..1003 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:47 Download gff for
FMO02332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29799897..29800888 | 8..992 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:11 Download gff for
FMO02332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25625619..25626610 | 8..992 | 97 | == | Plus |
