FMO02333.5prime Sequence
863 bp (863 high quality bases) assembled on 2008-05-14
> FMO02333.5prime
CAGTCGACATGAGGAGTGGCAGTTCGGAATTACTACTCGAGCAGCAACAA
CAAGAGCTACGGTTACGTAAAATCCGAGAACTGGCTCCGAAAAAGAAAAA
TGGCAATCGGCGCTTTCGTTCGTGGCGGGAACGTGCGCGTTTCTATGGAA
CCTCGACACTGGCCTTCTTCTCGGTGACCGCCGGGGCATCGCTGCTCTTC
CTCGTACCGCTCTATGTGGATCCGGCGATATCGACGCTTAGCCACGATTT
TATCGAGAAGCCAACGCTGTGCACGACGACGCGTCGCGAGGATCTAGTGG
GTATATTCAACTGTTCGTGGAGTTCGTGTCGCGAGGGCTGCACCTCCGAT
TTGTACCGCTGCGTGCATATCTATGTGACGTTCATTGAGCAGAACATTAC
GATACCGGAGAATATGACCGATTATAGCAACTTTACGTCCGATATGGAGC
AGTCCGGCGAGGCGACACTGCTTGTCAATATCAAGGGATGCGGCTATCCG
CCATCGGTGACGTGTAAGAACTTTAACGGTTACTACGGCATCGAGGGTGC
CATCTTTCCGTGCTTCTATTCGCGAAAGAACAAGACGGTGGTGCTGACAT
CGTACAACCACGACGACCAGGTGGCCATGATCATTCACTTCTTCGCGGTG
CCCTTTGTGATAACGGTCATCTCGTCCATTGCCCTGTGCATCATGCACTG
CGACTGCCGCTGCAAGAAGGATCGCAGCCACCGACGCAATCGGCCGCAGT
GCCGAAGGCCGCGCATCGAGAATCTCAGTGATACTTCGATATCAACGCGA
GTGGATATGCTCACGCCTGCTATTGAAGTCTACAAGCCGCCCCTCGCAAG
CTTTCTAGACCAT
FMO02333.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Teh1-RB | 4539 | CG12806-RB | 1055..1891 | 9..845 | 4185 | 100 | Plus |
| Teh1-RA | 4539 | CG12806-RA | 1055..1891 | 9..845 | 4185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9864969..9865738 | 778..9 | 3850 | 100 | Minus |
| 3R | 32079331 | 3R | 9828729..9828798 | 845..776 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:57:21 has no hits.
FMO02333.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:25:54 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:56:53 Download gff for
FMO02333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Teh1-RA | 1048..1891 | 1..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:58 Download gff for
FMO02333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Teh1-RA | 1048..1891 | 1..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:58 Download gff for
FMO02333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9828729..9828795 | 779..845 | 100 | <- | Minus |
| 3R | 9864969..9865745 | 1..778 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:56:53 Download gff for
FMO02333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5654451..5654517 | 779..845 | 100 | <- | Minus |
| arm_3R | 5690691..5691467 | 1..778 | 99 | | Minus |
