FMO02355.5prime Sequence
1151 bp (986 high quality bases) assembled on 2008-05-14
> FMO02355.5prime
CAGTCGACATGAGTGGCAAGCAGGTAGTCATCCTTCTGGGCAGTGTCCTG
ATCCTGGGATGCTTACAAGTGGCAGCGGCAACGGAAACGGATAACAAAAC
CAACGATTTCGTGGCCACCGACGAATGGCATACGATTGCGGAAGGTCAAG
CTATTCCAAGGGGCCTGCACGTGCGCATCAACCTACAAACGGGGCTCAAG
GAAGCCAAACTCTTAAACGAAAGCGAACGTGGCACGTCGCTGCAGAGTCA
ACCGGATGATCAGAATGCTCGGGAATCTCACGATGACAACGAACCCCTGG
CTCTGGACTATAAACCGGACATAATCGAGGAGTCTATACGGCGGGTCAAG
GAGCAGAAGAAGAGCTATGCCGAGCTACGCAAAGCGTACAAAGAGTTCCA
GAAGAACTTTCGCACCGACGGAGAACTGATCGTCCAGTTAATCGATCAGT
TTCGGAACTTCAGCAGAACGCCGCTAGAGTCAGAGATGCGCTCCAAGCTG
GACTGCCTGGAAAATCTGGAGTATTTGCTCCATCAGATAGACAATGCCTT
GATGTTCATTGATAATGGGGGATTGGATGATGTACTACTGCCCATTGTTG
TGAACGATACCAGTACATCCCTGAGAGTGTCGGCCATGCGTGTGTTGGGC
TCGCTGGCGAGCAACAATCCCAAGGCCCAGATCAAGGTGTTCGAAAAGAA
TTTCGGGTCTCATCTGGCTCAGATTCTGACCAGTTCCGGAAATGTCGGTG
AGATCTCCGCTGCATTGCACGCCTTTGGAGCCTTGTTGCGGAAATTTCCG
CTAGCCCAGCAGCGAGTGCTTTCCACCTCGGGTACACAGGCTCTGATCAA
GGTGCTCCAGAGTCCGGATGTGGAGCTGCGGAGCAAGGCGATGTAGTGAC
TCTCATAAGCGACCTAGTGCTGGAGAGCGGTCAGTGCTGATGTCAGCAAG
ATGATCCCGAGCCTCATCACATGCGCATATGTGCTCTGACTCGAGTCTGC
TGAAACGTCGGGCTACTGCCGGCGTGACCTGTGCTACCAGGAGTCTGCTC
CTCTAGACACGAGTGAGTGAACGCTGCCACGCATGCAACCACCGAGAAAT
TGGACCAACTGGTTCAGTTCGGTCTAGCTTCCAATTTCCGTGCATCGATT
G
FMO02355.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10420-RA | 1831 | CG10420-RA | 133..1200 | 9..1053 | 4725 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25234379..25235200 | 960..143 | 3880 | 99.3 | Minus |
| 3R | 32079331 | 3R | 25235260..25235397 | 146..9 | 675 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:08 has no hits.
FMO02355.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:56 Download gff for
FMO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10420-RA | 118..1132 | 1..1005 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:27 Download gff for
FMO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10420-RA | 129..1143 | 1..1005 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:39 Download gff for
FMO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10420-RA | 129..1143 | 1..1005 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:39 Download gff for
FMO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25234324..25235198 | 145..1005 | 98 | <- | Minus |
| 3R | 25235262..25235401 | 1..144 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:27 Download gff for
FMO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21060046..21060920 | 145..1005 | 98 | <- | Minus |
| arm_3R | 21060984..21061123 | 1..144 | 96 | | Minus |
