Clone FMO02358 Report

Search the DGRC for FMO02358

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:23
Well:58
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31781-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02358.5prime Sequence

386 bp (386 high quality bases) assembled on 2008-05-14

> FMO02358.5prime
CAGTCGACATGGCCAAACAGAGTGTTGCCAACTGCATTGCCGGGCTGCCA
ACGACTCAACCCCCGACCCGAGGACACCACCCTCCTCCCGGCCAGGAGGC
CAACGACGAGTCCTTTTTGGAGGCAGCGCATTGGCTGCAGGACGACCGGC
GACAGGACGACCAATCACCAATCAAATCGCGGCTTGTGCGCACTATCACG
GCCGTACGAAGGGCCAAAGGCACGGCATCCAGGACCTCAGCCGGAGACCC
CAAGCCGATTGTCAATCTCTTAGACATATTATTATGCCAACGTCTCCTAT
ATTATAGTTCTCTAGTCGTAAGTCACATGCCCAAGCCATCGCCCCAGAAC
ATCGGGGACATGAAACATGCAAGCTTTCTAGACCAT

FMO02358.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:59:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16877840..16878199 9..368 1800 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:59:40 has no hits.

FMO02358.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:47 Download gff for FMO02358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31781-RB 1847..2220 1..377 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:16 Download gff for FMO02358.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16877832..16878201 1..370 98 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:16 Download gff for FMO02358.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16877832..16878201 1..370 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:25 Download gff for FMO02358.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16877832..16878201 1..370 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:25 Download gff for FMO02358.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16877832..16878201 1..370 98 -> Plus