FMO02360.5prime Sequence
1204 bp (1034 high quality bases) assembled on 2008-05-14
> FMO02360.5prime
CAGTCGACATGTGGTCGCCGCGGGTTGCCCTACTTTTCCTGGCCCTAGCA
CTTAGCCAACCGGACGAGTTGGTGGAGGCCGCTGGTCCGCTGAAGGTGCT
GGGTCTTTTTCCCCATCCCGGAGTTAGCCACTTCCACTTCTTCCACCCCA
TCATGAAGGGTCTGGCCGAGGCGGGTCATGACGTGAGCGTGGTTTCCCAC
TTCCCGGACAAGCATCCGGTTGCCCACTACAAGGATTTCCCCCTCACCGG
AATGGACAAGCTCACGAACAGTGTTGATCTCAAGTTTTTCGAGAAGCGCA
CATTCTACAGTCACTTCCAGGAGTTCTTCCTGCTGTACGACTGGGGCAAA
CAGACATGCAACCTGACGCTCCGTTCGGAAGCACTGCAGCAGATCCTCAG
GCGTCCGGGACGCTTTGATGTGATCATCATGGAGCAATTCAACACTGACT
GCATGATGGGAGTGGCCCACCAGCTCCAGGCGCCGGTGATCGCCTTGAGC
AGCTGTGTGATGATGCCCTGGCACTACGAGCGAATGGGAGCTCCTTTGAT
ACCCTCTCACATCCCGGCGCTCTTCATGGCCCAGTCGCAGCACATGAACT
TTGGGGGACGACTGGCCAATTGGTTCAGCACCCACGCCTTAAATTGGATG
TACAAATTACTATCGGTTCCCGCTGCCGACGCCATGGTTCAGTACAAATT
CGGCCATGACGTGCCTTCGGTGGGCGAGCTGGTGAAGAACACATCCATGT
TCTTTGTGAACCAGCACTACTCGCTGTCTGGACCCAAGGTAACGCCGCCC
AATGTCATCGAGCTGGGTGGCATCCACATCCAGAAATCGAAGCCTCTGCC
TGCCGATCTGCAGCGCATTCTGGACATGCTGAGGAAGGAGTGATCCTGAT
TAGTTGGGGATCAATGATCCGGGCGAATTCCCTGTCGCGGCGAAAGGATG
GCATTATTCGGCGGTGGCTCGATAAAGCAGATGTTATCTGGAAATGGGAA
ACGAAACACTGCTACAGCCACCACATGCACATTATGAGTGTGCCACACCG
CGATATCCCTCTGCATCCCACGTCAGTGTTTCATGTCCACGCGACTCATG
GGCCACTCGAGCAGCTACTGGGGATTCCATGGGTGCAGCCCAGATGCATA
CAGTTGTCATACGGCGCTTTGGTTCAGCGAGGACAATGGGAAACATTATC
TCTT
FMO02360.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17323-RD | 2212 | CG17323-RD | 140..1283 | 9..1128 | 4995 | 97 | Plus |
| CG17323-RC | 1988 | CG17323-RC | 79..1222 | 9..1128 | 4995 | 97 | Plus |
| CG17323-RE | 2112 | CG17323-RE | 203..1346 | 9..1128 | 4995 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18824795..18825167 | 283..655 | 1865 | 100 | Plus |
| 2L | 23513712 | 2L | 18825234..18825598 | 656..1012 | 1445 | 97.5 | Plus |
| 2L | 23513712 | 2L | 18824306..18824581 | 9..284 | 1380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:54:17 has no hits.
FMO02360.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:03:49 Download gff for
FMO02360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17323-RA | 31..1121 | 9..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:36 Download gff for
FMO02360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17323-RE | 203..1293 | 9..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:56 Download gff for
FMO02360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17323-RE | 203..1293 | 9..1080 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:56 Download gff for
FMO02360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18824306..18824581 | 9..284 | 100 | -> | Plus |
| 2L | 18824797..18825167 | 285..655 | 100 | -> | Plus |
| 2L | 18825234..18825677 | 656..1080 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:36 Download gff for
FMO02360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18824306..18824581 | 9..284 | 100 | -> | Plus |
| arm_2L | 18824797..18825167 | 285..655 | 100 | -> | Plus |
| arm_2L | 18825234..18825677 | 656..1080 | 94 | | Plus |
