FMO02362.5prime Sequence
862 bp (862 high quality bases) assembled on 2008-05-14
> FMO02362.5prime
CAGTCGACATGCTGTTAAGAGCTTCGCTGCAGCAGAAGCAGCTATATGAG
GAGCGCAACAACAATATTGTGGCCAAGATCAACGAAGAGGTGATAGAAAA
ACAACCAGAAGCCTGCAACATCACAAATCCAAGTGCATTTGATGGCTCGA
CGGCCAGCGATATGGAGGTCGAGCCCATGGAATGGCAGGAGTCTATTGAA
GAGGAGGCGGCACAGAATGATCAGGATGAGGCTAAAAAAGGGGACGACAC
TCTATTGATGCTGCCGGCGGAGTCCATTGAAGAGGAGGCGCCACAGAAAG
GTCAGGATGAGGCTAAGGAAAAGGACGACACTATATTGATGCTGCAGGCG
GCCGATGCCGAGGAGCTGCCCCCAAGGCTTGAGGATTACATGTACTTTGT
GCTGGACACCAACGTCCTCATACACAACCACAAGTTCGTGGAGAGACTGA
CCGATGTGGTGCTGCCGGGCACGGTGGGCAGCATGCTGTACCTTCCGTAC
ATAGTAATCAAAGAGCTGGACAAGCTAAAGAGCAAGTACCAGTCGGACTG
CCTGCAGCGTGTGATTGCCATGCGAGCAATACGCTTTTTGAACACCAAGT
TCGACGAAAGCTTTCAAATACAAGCTCAATCCGCTTTGGAGGAGGCGGAT
CACCTGATCAAGATCGACTGCCCGGATGACAGCATTTTGAATTGCTGCCT
GCAGCTGCAGGCGCAAGTTCCCCACATGATCCTGCTCACCAACGACGCGA
ACCTTCGGCTCAAGGCCAATGCCTCCAACATTCAGTCTCCTGTCGCTCTG
ATCTGATGTCCACCTATGTGGATGAGTTCGCTGGCTTCGGCGATGCAAGC
TTTCTAGACCAT
FMO02362.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7206-RC | 1643 | CG7206-RC | 520..1357 | 8..844 | 4120 | 99.5 | Plus |
| CG7206-RB | 1585 | CG7206-RB | 462..1299 | 8..844 | 4120 | 99.5 | Plus |
| CG7206-RC | 1643 | CG7206-RC | 700..782 | 269..351 | 280 | 89.2 | Plus |
| CG7206-RC | 1643 | CG7206-RC | 781..863 | 188..270 | 280 | 89.2 | Plus |
| CG7206-RB | 1585 | CG7206-RB | 642..724 | 269..351 | 280 | 89.2 | Plus |
| CG7206-RB | 1585 | CG7206-RB | 723..805 | 188..270 | 280 | 89.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18089295..18089911 | 624..8 | 3055 | 99.7 | Minus |
| X | 23542271 | X | 18089011..18089233 | 844..623 | 1050 | 99.1 | Minus |
| X | 23542271 | X | 18089568..18089650 | 270..188 | 280 | 89.2 | Minus |
| X | 23542271 | X | 18089649..18089731 | 351..269 | 280 | 89.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:10:32 has no hits.
FMO02362.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:05 Download gff for
FMO02362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7206-RB | 426..1273 | 1..851 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:39 Download gff for
FMO02362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7206-RB | 457..1304 | 1..851 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:54 Download gff for
FMO02362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7206-RB | 457..1304 | 1..851 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:54 Download gff for
FMO02362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18089006..18089231 | 625..851 | 97 | <- | Minus |
| X | 18089295..18089916 | 1..624 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:39 Download gff for
FMO02362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17983039..17983264 | 625..851 | 97 | <- | Minus |
| arm_X | 17983328..17983949 | 1..624 | 99 | | Minus |
