FMO02363.5prime Sequence
1168 bp (1010 high quality bases) assembled on 2008-05-14
> FMO02363.5prime
CAGTCGACATGTACCACCTTGGACAGGATCTGCCAGGCAACGATGTGGAT
GATATAGAGGATCTGATATCCGCCGATGATGTCAAGCCGCGTGAGCGCTA
CGAAAACAAAAAAACCGTTACGGTTCGGGCCAAGAAACGATCCCAAATTC
GACTTGAATCTCAAGAGGAGGAGGAAAAGCCGAAGCCCACGATCCACGAG
AGTGTCATACCCGGCACCCAGAAAGTTTTTGTGAAAACATGGGGCTGCGC
CCACAACAATTCGGACTCGGAGTACATGGCCGGGCAGTTGGCTGCCTACG
GATATAGATTGAGTGGAAAGGAGGAGGCGGATCTGTGGCTGCTCAATAGC
TGCACGGTTAAGAATCCTTCGGAGGACACTTTCCGCAACGAGATTGAGTC
GGGAATGCGAAATGGCAAGCACGTCGTGGTTGCCGGTTGCGTTCCCCAGG
GAGCTCCCAAATCGGACTATCTGAACGGTCTTTCCGTAATCGGTGTCCAG
CAAATCGACCGAGTGGTGGAGGTCGTTGAAGAGACCCTCAAGGGTCACAG
TGTCCAGCTGTTGCAAAACAAAAAGAAGGTCCATGGTCGGCGGGTAGCTG
GAGCACCACTCTCATTACCCAAAGTCCGCAAAAATCCATTAATAGAAATC
ATATCCATCAACTCTGGATGCCTAAATCAATGTACCTACTGCAAGACTAA
ACACGCCCGCGGTGACTTGGCCAGCTATCCCCCGGAGGAGGTTGTAGAGC
GCGCCCGCCAATCGTTTGCTGAAGGCTGCTGCGAGATCTGGCTTACTTCC
GAGGATACAGGAGCTTATGGTCGAGATATTGGAAGCTCATTGCCGGAATT
GCTCTGGCAACTGGTGGAAGTGATCCCCGAGCACTGCATGTTGCGTGTAG
CATGACCAATCCACCGTATATACTGTAGCATCTCGAGGAGTGCCACGTCT
TGCAGCACCCGAGAGTCTACTCTTTTACATGTCTGTACAGAGTGTTATGA
CTCTGTGCTGGGCGAGATGAACGAGAGTACTGTCGCAGACTTTGAGCACG
TGTGATTTCTTAGACGGTCCCGGTTCCGATGCCACAGAATATATTGTGTC
CACGAGACAGAAGAAGAATTCAAGAAACAATGAACCTTGCGCCCAAAATC
GCCTTTCCAACTCCGTTC
FMO02363.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6550-RA | 1782 | CG6550-RA | 91..1158 | 9..1062 | 4980 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17426450..17427421 | 976..9 | 4655 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:19:39 has no hits.
FMO02363.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:06 Download gff for
FMO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6550-RA | 59..1129 | 9..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:46 Download gff for
FMO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6550-RA | 91..1161 | 9..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:19 Download gff for
FMO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6550-RA | 91..1161 | 9..1067 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:19 Download gff for
FMO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17426432..17427421 | 9..990 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:46 Download gff for
FMO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13313937..13314926 | 9..990 | 99 | | Minus |
