FMO02365.5prime Sequence
392 bp (392 high quality bases) assembled on 2008-05-14
> FMO02365.5prime
CAGTCGACATGAAAAAATCGGAAACCAAAACTGCGACCAACAACGGCAGT
GCCGCCGGAGCAGCTCCATCGGCAGCAGCCGCCGAGGCAGCCGCATCCGC
AGAGCCAACCAAAGCCGAGCTAGAGGCTGAATTCGATCCCAACGACAAGG
ATCTGTGCCATGCTGCATTGAAGATTCAGTCCACTTTCCGTGGTCATTTG
GCACGCAAGCTGGTGAACAAGGATGCGCCCGAGGACGAGGACATTCAGGA
GATAACCAAGAAGGTGGCCGAGGAGTTGGACATAGATTTAACCGATCCCG
AGCTTAACAAGGCTGCTACCAAAATTCAGGCCTCGTTCCGGGGCCACAAG
ACCCGCAAGGATGCCAATCCCGAGGCAAGCTTTCTAGACCAT
FMO02365.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| igl-RC | 2713 | CG18285-RC | 1034..1400 | 8..374 | 1835 | 100 | Plus |
| igl-RB | 1916 | CG18285-RB | 237..603 | 8..374 | 1835 | 100 | Plus |
| igl-RA | 2514 | CG18285-RA | 835..1201 | 8..374 | 1835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15188755..15188979 | 150..374 | 1125 | 100 | Plus |
| 2R | 25286936 | 2R | 15180568..15180710 | 8..150 | 715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:17:59 has no hits.
FMO02365.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:07 Download gff for
FMO02365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18285-RB | 240..610 | 8..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:45 Download gff for
FMO02365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| igl-RA | 835..1205 | 8..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:16 Download gff for
FMO02365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| igl-RA | 835..1205 | 8..379 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:16 Download gff for
FMO02365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15180568..15180710 | 8..150 | 100 | -> | Plus |
| 2R | 15188756..15188983 | 151..379 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:45 Download gff for
FMO02365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11068073..11068215 | 8..150 | 100 | -> | Plus |
| arm_2R | 11076261..11076488 | 151..379 | 99 | | Plus |
