FMO02370.5prime Sequence
1182 bp (935 high quality bases) assembled on 2008-05-14
> FMO02370.5prime
CAATCGACATGTGGTTCGTGTTGTATATTTTTCTGGCCCTACCACTGCTG
CTGGTTGCATATCTGGAGTTGAGCACATTCCGCCGGAGAAGAGTGCTTAA
CAAGTTCAACGGCCCCCGCGGCCTGCCGCTGATGGGAAACGCTCATCAAA
TGGGCAAGAATCCGTCAGAAATACTCGACACGGTTTTCTCCTGGTGGCAT
CAGTATGGAAAAGACAACTTCGTCTTTTGGATTGGAACGTATTCTAATGT
ATTGGTCACCAGCTCCAAGTACCTTGAATTCATACTCAGCAGTCAGACGC
TGATCACAAAGTCCGACATTTATCAACTAACACACCCTTGGCTGGGATTA
GGTCTCCTCACCAGTACTGGCAGCAAATGGCATAAACACCGCAAGATGAT
CACCCCAGCATTCCACTTCAACATCCTGCAGGACTTCCACGAGGTGATGA
ACGAGAACTCCACCAAGTTTATCAAGCACTTAAAGACAGTTGCTGCCGGG
GACAATATATTCGACTTCCAAGAACAGGCCCACTATTTGACCCTGGATGT
CATTTGCGACACAGCGATGGGTGTGTCCATCAATGCCATGGAAAACCGCA
GCTCTTCCATTGTGCAGGCCTTCAAAGACATGTGCTACAACATCAACATG
AGAGCCTTCCACCCGCTGAAGCGCAATGAACTGCTGTATCGTTTGGCTCC
GGACTACCCGGCCTATAGCAGGACTCTAAAAACACTGCAGGACTTTACCA
ACGAGATCATCGCTAAGCGCATTGAAGCCCACAAATCGGGTGCAGTTTCG
ACCAACGCGGGAGATGAGTTCACTCGCAAGAAATGGTCCTTTTTAGACAC
TCTGCTGTCCTCCACTATTGATGGTCGTCCCTGAACTCCAAGGGACTGTA
CGAAGAGGTCTCACATTTATGTTGAAGACATGATACTACCACTTCTGGAG
TGTCGTTCACTGTCTATTTGCTTTTCTAGACATCAGATGAACAGCGCATC
TATTAACGACCAACGCGTAGTAATGGTAATTCCGACTGGTCGCGATGCCA
CTTCAGGAAAAATCCAAATGAAGATACTAGAATCTCTTTGTCAAGCAGTC
CACGGGTTTCTATCCCAACGTGCTACTGACAATTACGGGAAAGACATGTT
AAAATGGTAACCTGTATACCACAGGGCCAACA
FMO02370.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4e2-RB | 1880 | CG2060-RB | 158..1283 | 9..1123 | 4950 | 96.9 | Plus |
| Cyp4e2-RA | 1783 | CG2060-RA | 61..1186 | 9..1123 | 4950 | 96.9 | Plus |
| Cyp4e1-RA | 1772 | CG2062-RA | 167..1042 | 123..994 | 1195 | 77.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8445534..8445883 | 279..628 | 1750 | 100 | Plus |
| 2R | 25286936 | 2R | 8445942..8446301 | 629..985 | 1485 | 96.7 | Plus |
| 2R | 25286936 | 2R | 8448106..8448452 | 282..628 | 940 | 84.7 | Plus |
| 2R | 25286936 | 2R | 8444771..8444930 | 9..168 | 800 | 100 | Plus |
| 2L | 23513712 | 2L | 9749150..9749427 | 628..351 | 595 | 80.9 | Minus |
| 2R | 25286936 | 2R | 8445356..8445467 | 167..278 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:30 has no hits.
FMO02370.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:00 Download gff for
FMO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2060-RA | 51..1151 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:11 Download gff for
FMO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4e2-RA | 52..1152 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:40 Download gff for
FMO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4e2-RA | 52..1152 | 1..1089 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:40 Download gff for
FMO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8444762..8444930 | 1..168 | 98 | -> | Plus |
| 2R | 8445358..8445467 | 169..278 | 100 | -> | Plus |
| 2R | 8445534..8445883 | 279..628 | 100 | -> | Plus |
| 2R | 8445942..8446311 | 629..994 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:11 Download gff for
FMO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4332267..4332435 | 1..168 | 98 | -> | Plus |
| arm_2R | 4332863..4332972 | 169..278 | 100 | -> | Plus |
| arm_2R | 4333039..4333388 | 279..628 | 100 | -> | Plus |
| arm_2R | 4333447..4333816 | 629..994 | 97 | -> | Plus |
